Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_023747.1 Length=59672 Score E Sequences producing significant alignments: (Bits) Value seq2902 149 2e-31 seq37656 93.3 2e-14 >seq2902 Length=689 Score = 149 bits (164), Expect = 2e-31 Identities = 327/484 (68%), Gaps = 22/484 (5%) Strand=Plus/Plus Query 54352 GCAGCTCGGCACGCTGGGCGGTGGTAATCACTTCATCGAGCTGTGCCTGGACCACCTCGA 54411 |||||| ||||| || ||| || || |||||| ||||| ||| | ||| | |||| Sbjct 191 GCAGCTGGGCACCCTCGGCTCGGGCAACCACTTCGTCGAGGTGTCCTCCGACGAGCTCGG 250 Query 54412 CCGTGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGTGTCGGTAACAAGATCGCGCAGAA 54471 ||| |||||| ||||||| |||||||| ||||| || || || ||| || | |||||| Sbjct 251 CCGGGTGTGGCTGTTCCTCCACTCCGGCTCGCGCGGGGTGGGGAACCAGCTGGCGCAGCG 310 Query 54472 GCACATTCAGGCCGCGCAGGGCTATTGCCAGGCGA-ACGG--GCTGCACG---TGCCGCA 54525 |||||| | || ||||||| |||||| |||| | | ||| ||||| | Sbjct 311 GCACATCCGGGTGGCGCAGGAG------CAGGCGGCACGGCGGTTTTACGACCTGCCGGA 364 Query 54526 CAAGGATCTGGCGTACCTCGTCGAGGGCACGGTCGAGTTCGACCGCTACCTCGTTGAATT 54585 | || || || |||||||| ||||| | ||||||||| |||| ||| | | Sbjct 365 CCGCGACCTCGCCTACCTCGTGGAGGGGGAGCCGGAGTTCGACGCCTACGTCGAGGCCCT 424 Query 54586 GCGTTGGGCGCAGCGGTTTGCGTACTACAACCGCGCCGAAATGATGGACCGATTCGAGCA 54645 | ||||||||||| || || | |||||||| || ||||||||||| ||| Sbjct 425 CCTGTGGGCGCAGCGCTTCGCCGCCCTCAACCGCGAGGAGATGATGGACCGCGTCGTCGC 484 Query 54646 GGCGTTC----AGGCATTGGGTCGGGGCCGACC--AGGGCGCCGAGCTGGTCGTCGAGAC 54699 ||| || |||| | || | |||| | || ||| || || | || ||||| Sbjct 485 CGCGCTCGCCGAGGCCCTCGGCCTGGGCGGGCCGGAGGACGTCG---TCCGCGAGGAGAC 541 Query 54700 CATCAACGCGCACCACAACTACACGCAGAAGGAGCGGCACGGCGACCGTGACGTGTGGCT 54759 ||| | |||||||||||||| ||| ||| || ||||| |||||||| Sbjct 542 GATCGGCTGCCACCACAACTACACCGCCCGCGAGACCCACTACGGGCGTGAGGTGTGGCT 601 Query 54760 GACCCGTAAGGGTGCGATCGACGCGAACGAGGGTGTGCGGGGCCTGATTCCGGGCTCGAT 54819 | |||| || || || ||| ||| |||||| | || ||||| | ||||| ||||| Sbjct 602 GTCCCGCAA-GGCGCCATCAGCGCCCGCGAGGGCGAGCTCGGCCTCGTGCCGGGGTCGAT 660 Query 54820 GGGC 54823 |||| Sbjct 661 GGGC 664 >seq37656 Length=523 Score = 93.3 bits (102), Expect = 2e-14 Identities = 89/113 (79%), Gaps = 1/113 (1%) Strand=Plus/Minus Query 54352 GCAGCTCGGCACGCTGGGCGGTGGTAATCACTTCATCGAGCTGTGCCTGGACCACCTCGA 54411 |||||| |||||| |||||||||| || |||||||||||||||||||| ||| | | Sbjct 362 GCAGCTGGGCACGTTGGGCGGTGGCAACCACTTCATCGAGCTGTGCCTCGACGAAGAGGC 303 Query 54412 CCGTGTGTGGTTGTTCCTGCACTCCGGTTCGCGTGGTGTCGGTAACAAGATCG 54464 || |||||| || | ||||||| ||| ||||| || ||||| || ||||| Sbjct 302 GCGGGTGTGGGTGATGCTGCACT-CGGGTCGCGCGGCGTCGGCAATGCGATCG 251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 190533528212400