Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024134.1 Length=139020 Score E Sequences producing significant alignments: (Bits) Value seq34300 358 6e-94 seq34711 324 1e-83 seq92934 141 8e-29 seq70970 105 6e-18 seq36477 105 6e-18 seq93744 104 2e-17 seq55262 100 3e-16 seq34215 98.7 9e-16 seq51106 96.9 3e-15 seq33499 95.1 1e-14 >seq34300 Length=21418 Score = 358 bits (396), Expect = 6e-94 Identities = 733/1083 (68%), Gaps = 36/1083 (3%) Strand=Plus/Plus Query 59380 TCGTCTTTTCTGTTAAATGTTGATCTTTCCCCGTTGAATTTTTCAAGTTCAGTCAGAAAT 59439 |||||||| ||| | | |||||| ||| || | ||| |||||||| ||| || Sbjct 7738 TCGTCTTTCCTGCTTACTGTTGACCTTGTGCCATCGAACGACTCAAGTTCTTTCATAAGA 7797 Query 59440 GCTTCCAGAGTATCAGGATGGAAACTGGATTTTACAATCCTCACCATTCCTTGTTGTGCA 59499 ||||| || | | | |||| | ||| || || ||||| | ||||| || | Sbjct 7798 GCTTCATAGGTTTTAATGTCGAAAGAGTTTTTAACTATTCTCACAAAACCTTGCTGCGAT 7857 Query 59500 AGATTG-GCAAAAGGTGAGAACCTTGTCAGTTTAGATTTGTTGGAAGGCATTGGGTCTTC 59558 | |||| |||||||| ||||| || || || ||||||||||| || |||| |||| Sbjct 7858 A-ATTGAGCAAAAGGAGAGAATCTCGTGAGCTTAGATTTGTTACCTGGTGTTGGATCTTT 7916 Query 59559 TTCAACCCTGAACCCTTCGGCGAGCAAGGATCTGGATGAGGTTAAGAACTCACTCTTACC 59618 |||||| | | || || | | | ||| |||||||| || || |||| Sbjct 7917 TTCAACAATATAACCATCAGAAATAAGCTGTCTTGATGAGGTATTAAATTCTGCTATACC 7976 Query 59619 TGCCTGACCAGGGTCCACAGAGAATACGATTATGCAATCATCACCATCAAACTGCGCCTG 59678 ||||||||||||||| |||||||||| |||| | ||||||||| ||| || ||||| Sbjct 7977 TGCCTGACCAGGGTCAACAGAGAATATGATTGTAACATCATCACCGTCATGCTCAGCCTG 8036 Query 59679 TTTCCTGATGATCACATCTCGTTCACCAGCCTTTTTACAGAACTTGCCTTCCAGACCTGT 59738 |||| | ||||| | ||||| ||| || || || || |||||| | || | | || Sbjct 8037 TTTCTTTATGATGAAATCTCTTTCCCCTGCTTTCTTGCAGAACCTACCATGCGTCTGAGT 8096 Query 59739 GGAATACCTCCCGTCATCCACGTTCTCAGGACAATAATCACCGGACAGGTAATAAAAGCC 59798 ||||| || ||||| | ||||||||| || |||||||| || | ||||||||| || Sbjct 8097 AGAATAATCACCATCATCGAAGTTCTCAGGGCAGTAATCACCAGAAATGTAATAAAATCC 8156 Query 59799 GTCGCTATCTTTACTTACCTTAATACTGGCGGTAAAGTCAGGAAATTTATTACCGGAAGT 59858 || | || ||| || ||| ||| || |||||||| || |||||||| | | Sbjct 8157 ATCAGTGTCCTTAGATATCTTTATAGATGCCGTAAAGTCTGGGGTCTTATTACCAGTGCT 8216 Query 59859 TCTCTCGGTTCCTGCCTTATCCCATGCCCTGCAAGATACTG-ATCCAAGGGGTACTCTAT 59917 || || |||||||| ||||| |||| || ||| |||| |||| | ||||| || Sbjct 8217 CCTTTCCGTTCCTGCTTTATCGTATGCTCTTACAGACACTGCATCC-ATGGGTAAGTAAT 8275 Query 59918 CGGCATCACGAAGGAAAGATCTTTGAAAATAGTTTGCACCCTCAGGCTTTGCAAACCAGT 59977 | | || | ||| |||||||||||| ||||| || | ||| ||||| Sbjct 8276 CAACTTCTTTTAAAAAACCTCTTTGAAAATAATTTGCGCCAGCGATACGAGCATTCCAGT 8335 Query 59978 TACCATGAAGAAGCTGAGCTTTTTCCAGTTCCGGCAGACCTTCAAGGAAAGCAAGGTATT 60037 |||||||||| |||||||| ||||| || || || | ||||| | ||||| | ||| | Sbjct 8336 TACCATGAAGGAGCTGAGCCTTTTCTAGCTCTGGTAATCCTTCCAAAAAAGCTAAGTAAT 8395 Query 60038 CTGGGTTGTCTCTTAAGCA--GACAGGATTATCGAATATTGTTGCGCCTATAAACGAGAA 60095 | ||||| | | || |||| | | || ||||| | |||||||| || ||||| ||||| Sbjct 8396 CAGGGTTAT-TATTTAGCATCGGC-GGGTTATCATAAATTGTTGCACCGATAAAAGAGAA 8453 Query 60096 TGACAACGGTCTTGGCTTGATCTCCACACCCAGTCCGTTAACCGTGGTGTATTTCTCTAT 60155 || | |||||| ||| ||| | |||||| | | | Sbjct 8454 AGAAATTGGTCTT------------ACA---------TTACC------GTATTTTTGTTT 8486 Query 60156 CAACTCTTCTTTAGAGTCTCCCCATATAAATTCACCGTCGCGTCGGATAAAATATCTTTT 60215 ||||||||| | |||||||| || ||||| || || | || || ||||||||||| Sbjct 8487 TAACTCTTCTGGACTTTCTCCCCAGATGAATTCTCCATCCTGGCGTATGAAATATCTTTT 8546 Query 60216 CTTACCGCATTTCTCCGGATCTGGATACCCTTCATCGTCCAACCACCATCTAACCAGTTT 60275 ||| |||| ||| ||||| |||| || || || ||||| || |||| Sbjct 8547 AACACCATCCCTCTCGGGAATGGGATA-GCTTCGTCATCTAAATACCATTCAATAAGTTC 8605 Query 60276 GGCAAGCATGTGTTCTGAATCGGGGTTACAGCTGATAACCATTCTTGATGGATACTTTGA 60335 | | || |||| ||| ||||||||| || ||||||||||| ||||| || || Sbjct 8606 TTTTATTTTATGGTCTGGATCTGGGTTACAGGACATTACCATTCTTGAGGGATATTTGGA 8665 Query 60336 CTGAGATCGCAGACGAGACATCAGATAGTCTATCTGCTCCCATTCGAACTGCGTGCCCTC 60395 | |||| || || ||||||| ||||| |||||||||||||| ||||| || | || Sbjct 8666 GTTTGATCTGAGGCGTGACATCATGTAGTCAATCTGCTCCCATTCAAACTGTGTACTTTC 8725 Query 60396 ATCGAAGCAAACCATGGTGTACTCAAGCCCCTGATGGTTAAGCTTATCTTGTACATACTC 60455 ||| | || || ||||||| | |||||| ||| | ||||||| ||| || || Sbjct 8726 ATCTACTGTAATCAGTGTGTACTGGTGACCCTGAATGTTTAATTTATCTTTTACGTATTC 8785 Query 60456 CAT 60458 ||| Sbjct 8786 CAT 8788 Score = 161 bits (178), Expect = 9e-35 Identities = 445/673 (66%), Gaps = 13/673 (2%) Strand=Plus/Plus Query 57796 TTAATTACTGCAGGAGTTTTTGGCAAGTAACCTACAGCACCGATCCTCTGGACAAACTTG 57855 ||||| || || ||| | |||| ||| | ||||||||| | | | ||| | | | || Sbjct 5404 TTAATAACAGCCGGAACTCTTGGTAAGAATCCTACAGCAGCTACACGCTGAATATATTTA 5463 Query 57856 GAGAAGCTCTCCATGTCCACTTCTTCAATCAGACCAGGTTTCAGTTTAGGCATATCATCA 57915 ||||| ||| | || || || | || || || | ||| ||| | |||||||| | | Sbjct 5464 GAGAATTCATCCTTATCAACATCAGCTATAAGTCCTGCTTTAAGTGTTGGCATATCTTTA 5523 Query 57916 TCTTCAAGGATGATACCATTCAATGCCAGAAGCTGTGGAATAAGATCTTTATTGAAGGCC 57975 || ||| || |||||||| || || | ||||||||||||||| |||||| | Sbjct 5524 TCAGAAAGATAAATTCCATTCAAAGCAAGCAATTGTGGAATAAGATCTGTATTGATACAC 5583 Query 57976 TCAGTGATAATATCTATATCACGCTGAACAAAATGACCATGGATAGACTGTTTTGACTCA 58035 || || ||||| ||||| | || |||||||| | || || | || ||||||||| Sbjct 5584 TCTTGAATGATATCAATATCCCTTTGCACAAAATGGCTGTGAATTGTTTGCTTTGACTCA 5643 Query 58036 GACAGGGAGAAGGATCCAACGTTATCGTTACCGAGGTTAATAAAGCCAGCACCGAAACGG 58095 |||||| | ||||| |||||| || |||||||| || ||||| || || | Sbjct 5644 GACAGGTTATATGATCCCTGACCATCGTTTCCAAGGTTAATGAATCCAGCGCCTAATCTA 5703 Query 58096 TCAAGAATCGCCTTCTTACGGGCATCAATCAAATCTTTAGTGGAATACTGCTTACCCATA 58155 || ||||| | || || | ||| || ||||| | | |||||||||||| | Sbjct 5704 TCGAGAATTG-ATTTTTCCTTGCAGTGATTAAATCAGATGAGTTATACTGCTTACCTGAA 5762 Query 58156 CCGTCAACCCCCTTCAGGGTCATGGAGTAAAGCTCTTTACCAGACT---TATCTCTATCA 58212 || |||| || |||| ||||| ||| || ||||||| | ||| ||||| Sbjct 5763 CCATCAATACCTTTCAAAGTCATCTCGTA---CTGTTTACCACCGTTAGTATTCGTATCA 5819 Query 58213 GACGGAAGTATAAAGAAACTTTGCTCACCACTATGGGCGTTTGCTGCGTCAAGCATAAGG 58272 || || | ||||| || ||| || || | || || |||||||| || |||||| Sbjct 5820 GATGGTAACATAAAATAAGATTGATCGCCTGTGTGTGCATTTGCTGCATCTTTCATAAGA 5879 Query 58273 TC-TGCAACCATTCTCCCTTCCATTG-AATTCGGGTCAATGCTGGCCTTGTTCAAAATAT 58330 | || | ||||| | | || | ||| || | ||| || || | ||||||| Sbjct 5880 CCTTGTACGAATTCTGCAT--CAGGGCCATTAGGATTAATAGCAGCTTTCTGCAAAATAG 5937 Query 58331 TGGAAGGAATTTTCAGCTCAAGCACACCACCAAGGTCTTTGGAACAGCCAACAACCTCAA 58390 | |||||| | | ||||| | |||||| | |||||| | |||||||| || | Sbjct 5938 TACTTGGAATTCTTAATTCAAGAATACCACCGAAGTCTTTAGTTACCCCAACAACTTCTA 5997 Query 58391 GGTTTTC-AATCAGAACTTTCTCACGGAAAGATCTGTAGCAACCTATCATAGGTGACACA 58449 ||| || | | ||| |||| || | |||| | | || ||| || || || || | | Sbjct 5998 AGTTCTCGATTAAGATCTTT-TCCCTAAAAGCTTTATAACAAGCTGCCAGGGGAGAAATA 6056 Query 58450 CCTGCAGGGTTAG 58462 ||| | ||||||| Sbjct 6057 CCTTCTGGGTTAG 6069 Score = 159 bits (176), Expect = 3e-34 Identities = 423/635 (67%), Gaps = 17/635 (3%) Strand=Plus/Plus Query 56902 GCATCATCATACCACATATCGAAGAAACGACGCAGGTATTCTTCAAAACTAAGCTCCACA 56961 ||||| |||||||||| | ||||| | | || |||| || | || | || Sbjct 4441 GCATCTGAATACCACATACCAAAGAATCTCTGAAGAAATTCCTCCATGCTTACAGTAACT 4500 Query 56962 GTAACTTGGCGAAGTGCCTTAACAATATCGTCTGTTAACTGCTCAGGATTAAGATCACTC 57021 ||||| || | || ||||| |||||| |||||||| | ||||| |||| ||| | Sbjct 4501 GTAACCTGTTGGAGATTCTTAATAATATCTTCTGTTAATTCTTCAGGCTTAATATCTGAC 4560 Query 57022 TTCATCAAAAGAGATACAGGTCTGTTGTTAGCGCTATAGCCTTGCGCCTTATGGCACAGG 57081 ||||| || | ||| || ||||| || || || | ||||| | | ||||| || Sbjct 4561 TTCATTAACAAAGAAACTGGTCTTTTATTTGCTGAGAACCCTTGTGATTCGTGGCAAAGA 4620 Query 57082 GCAATCCCCTTCTCTTTAATAGTAATCGTTTTTTCAGACATTATTCATT-GCCCTCTTCT 57140 ||||| || |||||||| | | | ||||| | || || |||| | ||||| | Sbjct 4621 GCAATACCTTTCTCTTTTA----ATTTCTTTTTACGGATGTTTAGCATTAGTCCTCTAGT 4676 Query 57141 ACAACACTGATCCCGAAGTTTACGTTGGTAATTTCACCAGTTTCTTCATCAACATTACCT 57200 | | ||| | || || | || |||||||||||||| || | | ||| Sbjct 4677 TC--CTCTGGGTCAAAA-TTAAGACCTGTTATTTCACCAGTTTCAG-AT--ATGTACCCT 4730 Query 57201 GTTGCCTGAATGCTTAGGCCACCAACAATGCCAGCCTTCTTAGCTTCCCATAATTCAGGA 57260 | ||||| || || || || |||| || || || || |||||| | | | Sbjct 4731 GAGCATTGAATACTGAGACCGCCTACAACACCTGCTTTTTTCAGTTCCCAAAGCTGGTCA 4790 Query 57261 TTATTGTATTTAACTTTAGCAACCCAAGAGCCAGCCTTGATGACCTGCTCAGTGCCAATT 57320 || |||||||| || ||||| ||||| || ||||| || ||| || |||||| Sbjct 4791 TTTTTGTATTTTACCTTAGCTACCCATGACCCAGCTGATATTTTCTGATCTGTGCCATCA 4850 Query 57321 ACTACAACATCAAACTCTTCTTGAATCCACGTCTTTTCAATAGTGAAAGCATCTGTAGAG 57380 || | |||||||| |||||||||||||| ||||| ||||| | ||| | || || | Sbjct 4851 ACAATGACATCAAATTCTTCTTGAATCCAAGTCTTCTCAATTCTAAAATCTTCAGTTGGT 4910 Query 57381 GTCAAGTGGAAAAGGTTTTC--AGAAACTAGGCCTGCGGCGTATGCTGCGTCCCAGTTAT 57438 |||| ||||| || ||||| || | || ||| | | | | || |||||| Sbjct 4911 GTCAGATGGAAGAGATTTTCTTTGACATTA--CCTTCCGATAAATTTTTCTCAAAGTTAT 4968 Query 57439 CTTTAGCCTTT-TTGATGGTGTCTTTACTCATCCACTCACCGTGAGCATCTTTAGTGTCA 57497 || | |||||| |||| || |||| | |||||| || ||||||||||||||| | | Sbjct 4969 CTCT-GCCTTTCCTGATTGTCTCTTCAGACATCCATTCCCCGTGAGCATCTTTAACATTA 5027 Query 57498 GGCTCGTAGATGATTTCGTAGGAAATCATTTCTTC 57532 ||||| |||| ||||||||| |||||| || || Sbjct 5028 GGCTCATAGACAATTTCGTAGCTAATCATCTCATC 5062 >seq34711 Length=8244 Score = 324 bits (358), Expect = 1e-83 Identities = 628/914 (69%), Gaps = 20/914 (2%) Strand=Plus/Minus Query 49705 ATCCAGAATACCGATATCCCAGTCCAGTTGACCTACTTCGGTTCCGTAAGTCAGGTCAGG 49764 ||| || | |||||| |||||||| |||||||| ||||| || |||||||||||||| || Sbjct 2144 ATCAAGTACACCGATTTCCCAGTCAAGTTGACCAACTTCAGTACCGTAAGTCAGGTCTGG 2085 Query 49765 CTGTTTCTGGATCCAACCGATTGTGGAAATACCAGGACCCTGGCTACCTTCCAGCAGAAC 49824 || ||| ||||||||||| | ||||||| |||||| || ||| | | |||| Sbjct 2084 TTGGCGCTGAATCCAACCGATAGAGGAAATAGAAGGACCTTGCGAACCAGTTAACTGAAC 2025 Query 49825 CGGGAAGAATACCAGACCAGTA--ATCGATGCCTGTTTCTGCCAGTCAGAAAGGTAAGCG 49882 || || | | ||| |||||| ||| ||| || ||||| | | || ||| Sbjct 2024 AGGAAAATAAATCAGTCCAGTAGAATC--TGCTTGACGTTGCCATAAGGCTAAGTTAGCA 1967 Query 49883 TTCCATACAGAAGTGTTCTGCAAAGATACAGTCATAACACCAGATTGGTTACGAGACAGG 49942 ||||| | || ||||| || | ||||| ||||||||||| || ||||||| || Sbjct 1966 TTCCAGCCTGAGGTGTTTTGAAGGGATACTGTCATAACACCTGAACGGTTACGGCTAAGA 1907 Query 49943 GCCGCAGACATTTCGCCATCCACACCAACGTGAGGGTAGATGTTGTCTTCGTTTCTTGAA 50002 || | ||| | ||| ||||| ||||| | ||| ||| ||||| ||||| ||||||| Sbjct 1906 GCTGAAGATAATTCACCATCAACACCCATGTGTGGGATAATGTTATCTTCATTTCTTGCT 1847 Query 50003 ACAACGATCTTGGTGTCAGCAGCGAAGCCAGTGACACGCTGCTGC-ATCAGGTACAGTTT 50061 ||||| || || || || || ||| | ||| || | ||| ||| ||| |||| || Sbjct 1846 ACAACAATTTTAGTATCTGCTGCGTAACCATAAACCCTCTG-TGCTCCCAGATACAACTT 1788 Query 50062 GACCTTTTTAGGATCATAAGCATAAGGAGTTAAAAT-TTG-----AGTTTCCATCTAGTC 50115 || || ||||||||| ||| |||| |||||||| ||| | | |||| || | Sbjct 1787 AACAGCTTGAGGATCATAGGCAAAAGGTGTTAAAATCTTGGTATTAAGTGCCATTTATTG 1728 Query 50116 TTCCTTATTCAGTCATTGCAACAGCATTGGTGGATTTAGAACCAACTTTGTCCAGAAGGA 50175 |||||| | || ||| ||| || || | | || | || || ||| | | | Sbjct 1727 CTCCTTAAGC-GTTGTTG--GTAGCGTTAGT--ACTCAG-ATCAGCTGCGTCTAACAATA 1674 Query 50176 CGTTGATCCGGATACGAACGAAGTGCAGGGCGTTGTTATACACCAGTTCTACTTTCACAC 50235 | | || ||| ||| |||||||| | ||| ||||| | | ||| || || ||| Sbjct 1673 CATAAATGTTGATTTTAACAAAGTGCAGTGAGTTATTATAAATAACTTCAACCTTAACAT 1614 Query 50236 CTTCCAGAACACGAGCAGCCAACTGATTGGTTGGAATCTCTGCACGTTTAGGAACTGTGA 50295 | |||||||| |||||| | | | |||||| ||||||||||| | || | Sbjct 1613 TGTTAAGAACACGGTTAGCCAAATCAGCTGATGGAATAGTAGCACGTTTAGGGATAGTCA 1554 Query 50296 TGATCGGGTCGTAGAACACATTGTTGTCTTCGTCAAAACCTGTCAGGATCGCACCATTCT 50355 | ||| || || || || | || | ||| | ||||| | || | ||||| | Sbjct 1553 CAACCGGATCATAAAATACTTGATTAGTTGAATCATATCCTGTTAAAATTGAGCCATTAT 1494 Query 50356 TAATGCCAGTGTTGATTGGGTTGTTCATCAGGACAGACTTGATAACCGGAAGATCATCAT 50415 |||||||| || |||||||||||||||| || ||||| | ||| || |||||||||| Sbjct 1493 TAATGCCAACATTAATTGGGTTGTTCATCATTACGGACTTAAGAACTGGCAGATCATCAT 1434 Query 50416 CAGACATCTTCATGCTTAAACCCATGTTGGAGCGACGATGCATGTACCCAAACATAGATT 50475 | ||||||||||| ||| |||| || || | | |||| || || | | ||||| Sbjct 1433 CGGACATCTTCATAGATAAGCCCAGATTAGATCTTTTACGCATATAAGCATAAACAGATT 1374 Query 50476 CTTCAGATCTGAACTTGATCCAGTGTGCAAAACGAATAGCGTCTGCATACTGACCTGAAG 50535 |||||| | || |||||||| ||||||||||| | || ||||| ||||| |||| Sbjct 1373 CTTCAGTACGCGCTTTCATCCAGTGAGCAAAACGAATGGTATCAGCATATTGACCAGAAG 1314 Query 50536 CACACTTACCTTCCCAGAAAGCACCAACACCGTTAATCATTCTG-TAGAAGTTAACGTGG 50594 | |||||||||||||||||||||| ||| | | | | ||||||||| ||| | Sbjct 1313 CTGTTTTACCTTCCCAGAAAGCACCAA-ACCCTGCGTATGCCCGATAGAAGTTACCGTTG 1255 Query 50595 TTTTCCCAAATAGC 50608 | ||||||| || Sbjct 1254 TGGCCCCAAATTGC 1241 >seq92934 Length=669 Score = 141 bits (156), Expect = 8e-29 Identities = 239/339 (71%), Gaps = 8/339 (2%) Strand=Plus/Plus Query 49697 AGCCATGCATCCAGAATACCGATATCCCAGTCCAGTTGACCTACTTCGGTTCCGTAAGTC 49756 |||||||| ||||| | ||||| |||||||||| ||||| ||||| || ||||||||| Sbjct 194 AGCCATGCGTCCAGTACGCCGATTTCCCAGTCCATCTGACCGACTTCTGTACCGTAAGTC 253 Query 49757 AGGTCAGGCTGTTTCTGGATCCAACCGATTGTG-GAAATACCAGGACCCTGGCTACCTTC 49815 || |||||||||||||||||||| || | ||| | |||| ||||| |||||| Sbjct 254 AGATCAGGCTGTTTCTGGATCCACCCAAAAGTGTTCAGGGACAGG-CCCTGAGAACCTTC 312 Query 49816 CAGCAGAACCGGGAAGAATACCAGACCAGTAATCGAT-GCCTGTTTCTGCCAGTCAGAAA 49874 | | | | || | || || || ||||| | || | || || ||||| | | || Sbjct 313 AATCTGGATAGGCAGAAAGACGAGGCCAGTCA-CGTTGGCTTGGCGTTGCCACTGCGCAA 371 Query 49875 GGTAAGCGTTCCATACAGAAGTGTTCTGCAAAGATACAGTCATAACACCAGATTGGTTAC 49934 | ||| | |||||||| || |||||||| | ||| | || | || ||||| | | || Sbjct 372 GATAACCATTCCATACGGAGGTGTTCTGGAGAGAGATGGTAACCACGCCAGAGTTATCAC 431 Query 49935 GAGACAGGGC--CGCAGACATTTCGCCATCCACACCAACGTGAGGGTAGATGTTGTCTTC 49992 | || || || ||| ||| || ||||| || || ||||| ||| | ||||||| | Sbjct 432 GGGATAGCGCTACGCTGAC--CTCACCATCAACCCCTACGTGGGGGATGTTGTTGTCGTT 489 Query 49993 GTTTCTTGAAACAACGATCTTGGTGTCAGCAGCGAAGCC 50031 ||| | || || ||| | ||| || || || || || || Sbjct 490 GTTACGTGCAATAACAACCTTCGTATCTGCTGCAAAACC 528 >seq70970 Length=636 Score = 105 bits (116), Expect = 6e-18 Identities = 184/260 (71%), Gaps = 6/260 (2%) Strand=Plus/Plus Query 130933 GGACGGTTCTTAAGACCTACCAGACGGACACGTCCACGAGAACGATCCACCAT-TTCTTC 130991 || |||||||| | | | || | ||||| |||||| | || || || | |||||| Sbjct 1 GGGCGGTTCTTCATAGCGACTATACGGATACGTCCTCTGGATCGGTCAGGAACGTTCTTC 60 Query 130992 GGCCTCGACACCTATGACTACCCAACTCAACTGTTCAAGCCCAGCCGATCCTCGCAAATT 131051 | ||||||||||| || | ||| | ||| || || | || || || || | | Sbjct 61 TGGCTCGACACCTAGCACAATCCAGGATAGCTGCTCTAGTGCTGCTGAACCACGTAGGTC 120 Query 131052 CTCTTTTCGCACAGGATACCAGAAAGGTAACGGGTTACCATCTTTGTCCTTAGGAGGCAC 131111 ||||| || |||||||||||||| ||||| | || |||||||| || || ||| | Sbjct 121 CTCTTA-CGAACAGGATACCAGAATGGTAAGGCATTTCCATCTTTATCTTTTGGA-ACTG 178 Query 131112 AATCTCTGTACGTTTGAGGTGAGCGATCAC-CAAGATAAACACGTTAAACTGCTTACAAA 131170 || ||| ||||||| | || || | ||| || |||||| || | | ||||||||| || Sbjct 179 GATTTCTTTACGTTTCATATG-GCAAACACTCAGGATAAATACATCATACTGCTTAC-AA 236 Query 131171 ACGCAGCCAGTTGGGTCATA 131190 | || ||||||| ||||||| Sbjct 237 ATGCTGCCAGTTCGGTCATA 256 >seq36477 Length=1037 Score = 105 bits (116), Expect = 6e-18 Identities = 292/446 (65%), Gaps = 4/446 (1%) Strand=Plus/Plus Query 31944 TGTTGCCGGGCCATAGTATGCACCAACCAGCAAACCATACTTACCAGCTACATAGCTGAG 32003 ||||||||| ||||| || |||||||| || | |||| ||| || |||| || | Sbjct 522 TGTTGCCGGACCATAATAAGCACCAACGAGAATCCCATGCTTTCCGGCTATGTATGTCGC 581 Query 32004 ATCTGCACCACAAGCTTTCAGCATTTCTGCCATAATGCTTGCTGGGGCCTCATCCATGTC 32063 ||| | || || |||||| || | | |||||| ||| || | ||| Sbjct 582 TTCTCCCGAGCAGGCAGACAGCATCGCTTCGAGAATGCTGGCTTTATTTTCGCTAAGGTC 641 Query 32064 AAACTCACCGTTAATGGTGTAACGTCGCTC--ACTGGTTCCGTCAGCGTTTTTTACCGCC 32121 || ||||||||||||||||| |||||||| ||||| | ||| | || | || | Sbjct 642 GAATTCACCGTTAATGGTGTAGCGTCGCTCTGTCTGGT--CACCAGTGCTTGTGACAATC 699 Query 32122 TCGTCGCATATGTTGGCAGCCTCCTTGAAGGACTCCCAGTTAATGGTTTCGTCAGGACAT 32181 || || | ||||| ||||| |||| || |||||||| |||| | |||||| | Sbjct 700 TCATCCGAAATGTTTGCAGCTTCCTGAAACTGATCCCAGTTGATGGCTGAGTCAGGCACT 759 Query 32182 TTAAGGTACGTTCTTAAATAGTCTAGGATCACCAAGGCCGCGTTATTGGTATACACCTCT 32241 |||||||| | || ||||||| || || || ||| || |||||| | || | Sbjct 760 TTAAGGTAGTTCCTGTAATAGTCCAGAATGCACAGGGCTGCATTATTGCTGTAAAGAGTC 819 Query 32242 TTACTGATACGAGGATCATAGCATTTTTTACCAACCTTGACAAGTGTAACGTTTGGCAAC 32301 | | | | | || ||||| | || | ||| ||| || | |||||| | Sbjct 820 TGCCCGGTTCTCGGGTCATAAACCTGACGTCCGAGCTTATCAACGGTGATGTTTGGAATG 879 Query 32302 CCAAAAGGAAACTTGTTAGGGTCAAACCTGAAGCTGGCACGTAGCCAACTGATCCCTCTA 32361 || | || || || | || |||||| | | | || | || | ||||||||| || || Sbjct 880 CCTGACGGGAATTTCTCAGCATCAAACTTAAGGGTGACCCGCAACCAACTGATGCCCTTA 939 Query 32362 CCTATCATGTCGGGTGACCATGATGG 32387 || |||||||| || ||||||||| Sbjct 940 CCGATCATGTCCGGCTTCCATGATGG 965 >seq93744 Length=597 Score = 104 bits (114), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 55359 CCTGAACAGTTTTCGGAGCATCAGGAGTGAAGTAACGACGGAAGTTCTGAACATCTGCGG 55418 ||||||| || ||||| |||| | | ||| |||||||||||||| ||||| Sbjct 254 CCTGAACGGTCTTCGGTGCATTCTCACTACCGTACTCACGGAAGTTCTGAATGTCTGCA- 312 Query 55419 CAGT-GATGCCTTTGTCCAGAGGGAAGAACGGGATGTTCAGGTTTTTAACCTGAGCACGT 55477 | || ||| |||||||||||||||||||||||||||||| | || | |||| Sbjct 313 CGGTCGATAGAACGGTCCAGAGGGAAGAACGGGATGTTCAGGTTCAACAGCTTGGTACGT 372 Query 55478 TCACTACCAACGTAGTTACGCTCACCACCACGACGGCGTGCCGGAATGTCGGTTACAACT 55537 |||| | | | | |||||||||||||||||| | ||||| || || | | | || Sbjct 373 TCACCAGCCAGATGGTTACGCTCACCACCACGCTGACGTGCTGGGATACGGCCTGCGCCT 432 Query 55538 TCATCAACACGCTCAATCTGAGCAATTGT 55566 || |||||||| |||| ||| || || || Sbjct 433 TCGTCAACACGTTCAACCTGTGCGATAGT 461 >seq55262 Length=779 Score = 100 bits (110), Expect = 3e-16 Identities = 140/194 (72%), Gaps = 7/194 (4%) Strand=Plus/Plus Query 132229 GCAGCCTGCCATGCTGCAATAACATCACCTTCTCCCTCACAAACGTTAATCTGCTTACGG 132288 ||||| | ||| || || | ||||||||||| || || |||||||||| || || ||| Sbjct 579 GCAGCTTCCCACGCCGCTGTTACATCACCTTCACCTTCTAAAACGTTAATTTGTTTCCGG 638 Query 132289 TTGTTGGAAGATGCACACA---GCTTTTGACCAAACATCTGGGAGTTGGCCTTTACGATG 132345 ||||| | | || | | || || |||||||||||||| ||| || || | Sbjct 639 TTGTT---ACCTAAACTTACTTGTTTCTGTCCAAACATCTGGGATGAGGCTTTAACAGTC 695 Query 132346 CCAACAACGGAGAAATGGCCCCTTTGCTCTTTAGGAATAGTCCAGTCACGCTTTTTGAAA 132405 || || |||| ||| || ||| | | |||||||| | ||||||||||||||||| || Sbjct 696 CCTACCACGGTGAAGTGACCCTTCTTGTCTTTAGGTAGTGTCCAGTCACGCTTTTTAAAT 755 Query 132406 CCAGACAGATTTCC 132419 || || | |||||| Sbjct 756 CCTGATA-ATTTCC 768 >seq34215 Length=11150 Score = 98.7 bits (108), Expect = 9e-16 Identities = 240/351 (68%), Gaps = 16/351 (5%) Strand=Plus/Minus Query 3595 AACCTCTACAATGATAAAGCGGTTAGCCAGAGGGGCTTCGAGCGC--CGAAAGAACCGC- 3651 || ||| | ||| || || ||||||||||| || ||| ||| |||||||| | Sbjct 2846 AATCTCGAAAATCATGAAACGGTTAGCCAGTGGT--TTC-AGCAGTTCGAAAGAAGAACC 2790 Query 3652 ACCATCTGTAGAACGGTTACCAGCAGCCACAAAAACAGAACCTTTAGGGAATGCATAGGT 3711 |||||| ||||||||| || || || || || | |||||| ||||| | ||| | Sbjct 2789 ACCATCACCTTCACGGTTACCTGCTGCTACGAACACTGCACCTTTGGGGAAAGTGTAGTT 2730 Query 3712 ACCGCACTTGTGGTCAAGCATAATTTGCATTGCAACCTTTTGCAG-GTAGTTATCTGCAT 3770 |||| ||| ||||| || | || || || | | |||||| | || | ||| | Sbjct 2729 ACCGATCTTATGGTCCAGAACAACCTGATAAGCTGCTTGTTGCAGTGGAGC-AGATGCGT 2671 Query 3771 GAGTGAGCTCATCCAGAAAGATAATTCCGCTCCAGTTCGGATCTGCAGGCCAAAATTCT- 3829 | ||||||||||| ||||| || || ||||||| ||||||| |||||| | | || Sbjct 2670 TGCTCAGCTCATCCAGGAAGATGATACCTTTCCAGTTTGGATCTGTAGGCCACA-TGCTA 2612 Query 3830 GGAATTGCAAACACTGTACGTGTAGTTCCAT----CAGCTTCTACAGGGATAGGTAGCCC 3885 || |||| | || ||||| | |||| ||| | ||| || | || | || Sbjct 2611 GGTGTTGCGTAAACAGTACGAACATCACCATTTTCCAGAGT-TACCGGAACTGGCACACC 2553 Query 3886 AGATAAGTCGGCAGGATCTTTATCTGACAGTCGCACGTCAA-CAAGGTTGT 3935 | ||||||| ||||||||||| ||||| || ||||||| |||| |||| Sbjct 2552 TGCCAAGTCGGTTGGATCTTTATCAGACAGACGAACGTCAACCAAGTTTGT 2502 >seq51106 Length=620 Score = 96.9 bits (106), Expect = 3e-15 Identities = 173/246 (70%), Gaps = 5/246 (2%) Strand=Plus/Minus Query 130924 GTTTTTGCTGGACGGTTCTTAAGACCTACCAGACGGACACGTCCACGAGAACGATCCACC 130983 |||| || ||| |||||||| | | | || | ||||| |||||| | || || || Sbjct 410 GTTTGTG-TGGGCGGTTCTTCATAGCGACTATACGGATACGTCCTCTGGATCGGTCAGGA 352 Query 130984 ATTTCTTCGGCCTCGACACCTATGACTACCCAACTCAACTGTTCAAGCCCAGCCGATCCT 131043 | |||||| | ||||||||||| || | ||| | ||| || || | || || || Sbjct 351 AGTTCTTCTGGCTCGACACCTAGCACAATCCAGGATAGCTGCTCTAGTGCTGCTGAACCA 292 Query 131044 CGCAAATTCTCTTTTCGCACAGGATACCAGAAAGGTAACGGGTTACCATCTTTGTCCTTA 131103 || | | |||||| || |||||||||||||| ||||| | || |||||||| || || Sbjct 291 CGTAGGTCCTCTTTACGAACAGGATACCAGAATGGTAAGGCATTTCCATCTTTATCTTTT 232 Query 131104 GGAGGCACAATCTC-TGTACGTTTGAGGTGAGCGATCAC-CAAGATAAACAC-GTTAAAC 131160 ||| | ||| || | ||||||| | || || | ||| || |||||| || | | || Sbjct 231 GGAAACTGAATTTCATTTACGTTTCATATG-GCAAACACTCAGGATAAATACAATCATAC 173 Query 131161 TGCTTA 131166 |||||| Sbjct 172 TGCTTA 167 >seq33499 Length=26748 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/148 (75%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 127771 ACCTCTCTGCCTGCTACTTTTGTATATGCCTCAGCATTGTTTTGGTGTGC--GTCTCCGT 127828 |||||||| ||||| |||| |||| || |||||||| ||| || ||| |||| Sbjct 15509 ACCTCTCTTCCTGCAACTTGGCTATAAGCTAGGGCATTGTT--GGTATGGCTGTCGCCGT 15452 Query 127829 TACTTACAACATCATAATACAAGCCGTTGTCGAACTCAAAGGCACCCCAAGCCCCGATAA 127888 || |||||||||||||| || |||| |||||| ||| | | |||||||| | |||| Sbjct 15451 TAGAAACAACATCATAATATAAACCGTGGTCGAAATCATATGACGCCCAAGCCGCAATAA 15392 Query 127889 GCTGCTCTAAGTTGGACCCGTCAATACC 127916 ||||||| | || || || |||||||| Sbjct 15391 GCTGCTCAAGATTAGATCCATCAATACC 15364 Score = 91.5 bits (100), Expect = 1e-13 Identities = 86/110 (78%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 128053 GCAGGAAGCTTATGGTCAATCTTCAAACGTGGGTGATTAAGAAGACCAGTGTCAACCTTA 128112 |||||||||||| ||||| | || ||| |||||||| ||||| || || ||| |||| Sbjct 14005 GCAGGAAGCTTACCATCAATATCCAGACGAGGGTGATTCAGAAGCCCCGTATCATTCTTA 13946 Query 128113 TCCTCCTTGATTGGATCAAGTACCGATCTGCGGTTTCGCAATGATAACCA 128162 ||||| | |||||||||||| || || | | ||||||||| |||||| Sbjct 13945 TCCTCATCGATTGGATCAAGAACTGAACGTCTGTTTCGCAAACTTAACCA 13896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444011636240000