Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024142.2 Length=72583 Score E Sequences producing significant alignments: (Bits) Value seq27013 104 1e-17 >seq27013 Length=32742 Score = 104 bits (114), Expect = 1e-17 Identities = 157/223 (70%), Gaps = 3/223 (1%) Strand=Plus/Minus Query 57840 TCTTCCTCTGCTTGCATACCTTTCTGGTTCTTACCCCAGTGACTTGGCATCACTGGTTCA 57899 ||||| | ||| ||||||||| |||||||||||||| ||| | ||||| ||||| Sbjct 8788 TCTTCTTTTGCCTGCATACCTGGTTGGTTCTTACCCCAATGAATAGGCATTGCTGGTGAT 8729 Query 57900 TTACGAACCTGTTCGATGAACTTAGCGGTAGGGATAGCACGACTACTTGAAGCATTGCGG 57959 | ||| | || | | ||||| ||||| |||||| ||| ||||| ||| Sbjct 8728 TGACGGATAATGTCAAGCATTTTAGCCACAGGGACCGCACGAGAACTCATTGCATTACGG 8669 Query 57960 TTGAATACACGGTGAGTCATAAACTCACTGTGAATGAATCGGGGATAAACCAATTCAAAA 58019 | |||| ||||||||||||||| || | |||||| ||||| ||||| || |||||| Sbjct 8668 CTAAATAAACGGTGAGTCATAAATTCCCCGTGAATATATCGGTGATAAGTCAGTTCAAAT 8609 Query 58020 GTTGTGATACGAGTTCCTGTTTCTGGATGAACGGAATCTGCAA 58062 |||| ||| |||| |||||| ||| |||| |||| Sbjct 8608 GTTGCAATATTTTTTCC---TTCTGGTGAAACAGAATAAGCAA 8569 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231772153155200