Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024143.1 Length=53255 Score E Sequences producing significant alignments: (Bits) Value seq77134 152 2e-32 >seq77134 Length=829 Score = 152 bits (168), Expect = 2e-32 Identities = 172/228 (75%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 41065 CCGTAGAGCCACGCGATCGAGTCGCGGATCTCGAAGCCCGCGTCCTCGATGGCCACGGTC 41124 ||||| | ||| |||||| ||||||||||||||| || |||||||||||| |||| | Sbjct 691 CCGTAAACCCAGGCGATCATGTCGCGGATCTCGAACCCGGCGTCCTCGATGCGGACGGCC 632 Query 41125 AGCCGGTGCCAGGTGCGGGAGCCGCCGAAGGCGAGCAGGTGCCCACCGGGCTTGAGGACC 41184 | |||||| |||||||| |||| | || || |||||||| || || |||||||| || Sbjct 631 ATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGCAGGTGGCCGCCAGGCTTGAGCACG 572 Query 41185 CGCAGGCATTGCTCCCACATCTCGACGTCGAAAGCGATGCCCG-AGTTGTCCCACTTCTT 41243 |||||||| | |||| |||||| || || || || || |||||| | | Sbjct 571 CGCAGGCACTCAGCCCAAATCTCG--GT-----GCTTGGCACGTCGTAGTCCCAGCGCCT 519 Query 41244 GCCCATGAAGGCCAGTTCGTAGGGCGGGTCGGTGACGATGGAGTCGAC 41291 |||||||| ||||| |||| ||||| ||||||||||| || ||||| Sbjct 518 ACCCATGAACGCCAGGCCGTATGGCGGATCGGTGACGATTGAATCGAC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 170030901346200