Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024360.1 Length=138036 Score E Sequences producing significant alignments: (Bits) Value seq40267 149 6e-31 >seq40267 Length=1041 Score = 149 bits (164), Expect = 6e-31 Identities = 501/779 (64%), Gaps = 2/779 (0%) Strand=Plus/Minus Query 104942 GCTACACTTGACTCACCTCAAACACGTTTTATTTATAATATCGCAGAATATGTCAGTGAT 105001 || || || || || || || || || || || || || |||| ||||| ||| || Sbjct 1024 GCCACGCTGGATTCGCCGCAGACGCGCTTCATCTACAACGTCGCCGAATACATCACCGAC 965 Query 105002 GCCTCTGTTCATGCTATTACTGCTATCATTGCACAACAAGAAGCTATTCATAACGAAAGC 105061 | | | || || | | || ||||| | || || |||| || || ||||| ||| Sbjct 964 CCGGCCGCGCACGCCAACGCCGCGATCATCGGCCAGCAGGAAGTGATCCACAACGAGAGC 905 Query 105062 TACTCTTATGTACTTGCTTCTATTACTAACTTACAGGAGCAGAATCGAGTATTTGAGGAA 105121 ||||| || || || || || || | | | || ||||| || || || ||| Sbjct 904 TACTCGTACGTGCTGGCCTCGATCGCCGGCCTGGCCGACCAGAACCGCGTGTTCGAGATC 845 Query 105122 GCTAGAACACACCCTACGATTATTAAACGTAATGCACCTATTATGGAGTCTTATGACGAT 105181 || | || || || || || || || || || || ||| || | |||||||| Sbjct 844 GCCCGCACGCATCCGACCATCATCGCGCGCAACCAGCCGATCATGCAGGCCTATGACGAC 785 Query 105182 TTCATGAATAATAAAACACCTGAGAATATGGTAAAAGCTTTAGTACAATCATCTATCTTA 105241 |||||| | || || | |||| || | | | | || || || ||| | Sbjct 784 TTCATGCGCGAGAAGACCGCAGAGACCCTGCTGCGCTCGCTGATCCAGTCCTCGATCCTG 725 Query 105242 GAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTATAACCTCGTTCGTCAAAACAAG 105301 || || || || ||||| ||| || || || ||||| ||||| || || || ||| Sbjct 724 GAAGGCATCAACTTCTATTCCGGCTTCGCGTATTTCTACAACCTGGTGCGGCAGAACCGC 665 Query 105302 ATGACAGGGACAGGTAAAATCATCAGCTTCATTAATCGTGATGAGTTAGCCCATTCGAAG 105361 ||||| || || || || |||||||||||||| || || || ||| | ||||| | ||| Sbjct 664 ATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAGCTGGCCCACACCAAG 605 Query 105362 TTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAACTACAAACAGATGAA 105421 || || ||||| || | || || | || || ||| | || || || || | || Sbjct 604 TTCATCAGCGAGCTGATCCGCGCCATCATCGGCGAGAACGCCGAGCTGCAGACCAACGAG 545 Query 105422 CTAAATGACTACGTATATGCTTCTTTTAGACATGCTGTAGAGCTAGAACAAGCATGGTCT 105481 || | |||||||| | | || ||| || | ||||| | || ||||| Sbjct 544 CTGACCGACTACGTGCACCAGGCCTTCGAACACGCGATCCGCCTAGACCGAG--TGGTCC 487 Query 105482 AGTGAGGTACTACAGGGCATTGAAGGAATTGATGTGGAAGAAATGTTAGACTATGTAAAA 105541 || || || | ||||| || || || || ||||| || ||| | | || || || Sbjct 486 TCGGAAGTGCTCGACGGCATCGAGGGCATCGACGTGGACGAGATGATCCAGTACGTGAAG 427 Query 105542 TATCGCGCTAATAAAATGTTAGGGATGCTAGGTCTCCAACCAATGTATCAAGGTCACACA 105601 || ||||| || || |||| || ||||| || || | |||| || || Sbjct 426 TACCGCGCCAACAAGATGTCCGGCATGCTCGGCATCGAGAAGCTGTACAGCGGCGCCAGC 367 Query 105602 GAAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTTACAGAAACAAAAACCGAT 105661 || || ||| | ||||| || || |||||||| ||||| || || || || ||||| Sbjct 366 GACAACGTGATGCCGTGGATCAAGGCCTACGCCGACAACTTCACCGAGACCAAGACCGAC 307 Query 105662 TTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAGACAATGGGTTCGATGA 105720 || ||||| ||||| ||| | || |||||||| || |||| ||||| || ||||| || Sbjct 306 TTCTTCGAGATGCGCAACGCCAGCTACAAGAAGACCAACTCGGACAACGGCTTCGACGA 248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440867964848000