Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq29027 159 9e-35 seq41145 89.7 1e-13 >seq29027 Length=2418 Score = 159 bits (176), Expect = 9e-35 Identities = 213/296 (72%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 38194 ATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGAG 38253 ||||| || | || || ||||| ||||| | | || | || ||||| ||||| || Sbjct 1171 ATGGCCAGTCGTGGCGTTAACAAAGTGATTCTTGTCGGGAATCTGGGTCAGGATCCGGAA 1112 Query 38254 GTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGTT 38313 || || || | |||| || ||||| || || ||||| || | || || |||||| Sbjct 1111 GTACGTTACATGCCAAATGGTGGCGCTGTCGCCAACATTACGCTGGCTACCTCTGAGAGC 1052 Query 38314 TGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTTG 38373 ||||| || ||||| ||||| | ||||||| || || |||||||| || || Sbjct 1051 TGGCGCGACAAGCAGACCGGTGAAAACAAAGAGATCACCGAATGGCACCGTGTCGTGCTG 992 Query 38374 TTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATATT 38433 ||||| || ||||| ||||| || || |||||||| || ||||| ||||| || |||||| Sbjct 991 TTTGGCAAACTGGCGGAAGTGGCGGGGGAATACCTGCGTAAAGGTTCTCAGGTGTATATT 932 Query 38434 GAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 ||||||||||| || || |||| |||||| |||||||||| || ||||| Sbjct 931 GAAGGCCAGCTGCGCACCCGTAAATGGCAGGATCAGGGCGGTCAGGAACGTTACAC 876 >seq41145 Length=866 Score = 89.7 bits (98), Expect = 1e-13 Identities = 78/96 (81%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 21637 GGCGCTGGCGATGGCTCAACTACGTTCAA-CGTGCCAGATCTGCGCGGCGAGTTCATCCG 21695 ||||| || |||||||| || |||||||| | |||| || ||||||||||||||| | || Sbjct 821 GGCGCAGGGGATGGCTCCACCACGTTCAAACCTGCCGGACCTGCGCGGCGAGTTCCTGCG 762 Query 21696 CTCATGGGATGATGGGCGCGGCATTGATGCTGGACG 21731 | | ||||| ||||| |||||| | |||| ||| || Sbjct 761 CGCCTGGGACGATGGCCGCGGCGTCGATGGTGGTCG 726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132693563406600