Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024383.1 Length=135831 Score E Sequences producing significant alignments: (Bits) Value seq40267 143 2e-29 >seq40267 Length=1041 Score = 143 bits (158), Expect = 2e-29 Identities = 343/514 (67%), Gaps = 5/514 (1%) Strand=Plus/Minus Query 96664 CAATCATCTATCTTAGAGGGTATTAATTTCTACAGCGGTTTTGCTTACTTCTACAACCTC 96723 || || || ||| | || || || || ||||| ||| || || || ||||||||||| Sbjct 739 CAGTCCTCGATCCTGGAAGGCATCAACTTCTATTCCGGCTTCGCGTATTTCTACAACCTG 680 Query 96724 GTTCGTCAAAACAAGATGACGGGGACAGGTAAAATCATTAGCTTCATTAATCGTGATGAA 96783 || || || ||| ||||| || || || || ||||| |||||||| || || || || Sbjct 679 GTGCGGCAGAACCGCATGACCGGCACCGGCAAGATCATCAGCTTCATCAACCGCGACGAG 620 Query 96784 TTAGCCCATTCGAAATTTATTTCTGAGCTAATTAGAGCTATTGTAGGGGAAAACCCTGAA 96843 | ||||| | || || || ||||| || | || || | || || ||| | || Sbjct 619 CTGGCCCACACCAAGTTCATCAGCGAGCTGATCCGCGCCATCATCGGCGAGAACGCCGAG 560 Query 96844 CTACAAACAGATGAACTAAATGACTACGTGTACGCTTCTTTTAGACATGCCGTAGAGCTA 96903 || || || | || || | ||||||||| || | || ||| || | ||| Sbjct 559 CTGCAGACCAACGAGCTGACCGACTACGTGCACCAGGCCTTCGAACACGCGATCCGCCTA 500 Query 96904 GAACAAGCGTGGTCTAGTGAGGTACTACAAGGCATTGAAGGAATTGATGTGGAAGAAATG 96963 || | | |||||| || || || | ||||| || || || || ||||| || ||| Sbjct 499 GACC--GAGTGGTCCTCGGAAGTGCTCGACGGCATCGAGGGCATCGACGTGGACGAGATG 442 Query 96964 TTAGACTATGTAAAATATCGTGCTAATAAAATGTTAGGGATGTTAGGTCTTCAACCA-AT 97022 | | || || || || || || || || |||| || ||| | || | || | | | Sbjct 441 ATCCAGTACGTGAAGTACCGCGCCAACAAGATGTCCGGCATGCTCGG-CATCGAGAAGCT 383 Query 97023 GTATCAAGGTCACACAGAAAATTCTATGACATGGATTAAAGCTTACGCCGATAACTTTAC 97082 ||| || || || || ||| | ||||| || || |||||||| ||||| || Sbjct 382 GTACAGCGGCGCCAGCGACAACGTGATGCCGTGGATCAAGGCCTACGCCGACAACTTCAC 323 Query 97083 AGAAACAAAAACCGACTTTTTCGAAATGCGTAACTCTAGTTACAAGAAAACAAACTTAGA 97142 || || || |||||||| ||||| ||||| ||| | || |||||||| || |||| || Sbjct 322 CGAGACCAAGACCGACTTCTTCGAGATGCGCAACGCCAGCTACAAGAAGACCAACTCGGA 263 Query 97143 CAATGGGTTCGATGACTTATG-AGGGTAGGGATT 97175 ||| || ||||| || | || |||| |||||| Sbjct 262 CAACGGCTTCGACGATCTCTGAAGGGCCGGGATT 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433844345793600