Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2641 143 5e-29 >seq2641 Length=263 Score = 143 bits (158), Expect = 5e-29 Identities = 149/194 (77%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || ||||| | |||||||||||||||||||| || || ||||| | || ||| ||| Sbjct 234 CGAAGAACCAGATGCAGAGTAGATTCTTTCTGAATGTTGTAATCGGCAAGGGTTCGACCA 175 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| | || || ||||||||||| |||| ||||||||| || || || || ||||| Sbjct 174 TCTTCCAACTGCTTACCAGCAAAGATGAGTCGTTGTTGATCGGGGGGAATACCCTCCTTG 115 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 |||||||| || | ||| ||||| || || ||||| || ||| ||||| | || || Sbjct 114 TCTTGAAT-TTGGTTTTGACATTGTCGATAGTATCCGAAGATTCAACTTCAAGGGTGATA 56 Query 82776 GTCTTGCCTGTCAA 82789 |||||||| ||||| Sbjct 55 GTCTTGCCGGTCAA 42 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 980188070171700