Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_024782.1 Length=36838 Score E Sequences producing significant alignments: (Bits) Value seq74251 168 2e-37 seq60360 138 3e-28 >seq74251 Length=708 Score = 168 bits (186), Expect = 2e-37 Identities = 327/471 (69%), Gaps = 30/471 (6%) Strand=Plus/Minus Query 3263 CATGAAATCAAGGCGCTGCGCCCGTTCATTCGCCGC--GACTTCACCAAGCTGCTCCCGA 3320 || ||| ||||||| |||| || ||| || ||| ||| || || ||| |||| Sbjct 684 CAGGAACTCAAGGCCCTGCAACCTTTCCGCCGACGCTCGAC--CAAAAACCTGTTCCCCG 627 Query 3321 CCGACGTCTATTCATGC--GACGGCCACACGTTCGACGCCGAGGTCCAGCACCCGATGCA 3378 ||||||| ||| | |||||||||| ||||||||||||| || |||| || Sbjct 626 GGGACGTCT--TCACGGCGGACGGCCACAAGTTCGACGCCGAGATCATCAACCCTCTGAC 569 Query 3379 CGGCCGGCCCTTCCGGCCGGAAATCACCACCATCATCGACATCCGTACCCGTCGAATTCC 3438 |||| ||| | | | |||||||||||||| | |||||| || ||||| || | Sbjct 568 GGGCCAGCCGTACAGACCGGAAATCACCACGGTTATCGACGTCGCCACCCGGCGCGTAGT 509 Query 3439 GGGATGGTCCACCGGCTTGGCCGAGTCGGCCCTGGTGGTGGTCGATGCCCTGCGTGACGC 3498 ||| || |||| ||||||||||||| | | ||| | || | |||||||||||| Sbjct 508 GGGTATTTCGGTCGGCGAGGCCGAGTCGGCCATCGGTGTGCTGGACG-CCTGCGTGACGC 450 Query 3499 CTGCACCAAGGGCG-GCATTCCGGCCATCTTCTACGTGGACAACGGCTCGGGCTACATCA 3557 | | || || |||| || | |||||||||||||| || ||||||| | || Sbjct 449 CATC----CGGTCGTGCATGTTCGCTGTGTTCTACGTGGACAATGGTTCGGGCTTCGCCA 394 Query 3558 ACCACATGATGCGCGACGAGGCGGTCGGCCTTATGGGCCGCCTGGGCATCGA-TATGAAG 3616 | ||| ||||||| ||||| ||| |||||||||| ||| |||| | Sbjct 393 ATGACACAGTGCGCGA------GGTCG------TGGACCGCCTGGGCGGCGACCATGACG 346 Query 3617 AACAGCCTGCCCTACAACAGCCAGGCGCG-GGGCGTGATTGAGCGCGTCCACCAGAGCCT 3675 || |||||||||||||||||||| || || | || | ||||| | |||||||| | | Sbjct 345 CACTCGCTGCCCTACAACAGCCAGGCACGCGGTCCTG-TCGAGCGAG-CCACCAGACCAT 288 Query 3676 GTGGATTCGGGCCGCCAAGGAACTGCCCGGCTACATCGGCGCCGACATGGA 3726 ||| | || |||||| | ||| || ||||||||||||| |||||||| Sbjct 287 TTGGGTCAATGCGGCCAAGAAGCTGACCAGCTACATCGGCGCAGACATGGA 237 >seq60360 Length=752 Score = 138 bits (152), Expect = 3e-28 Identities = 221/312 (71%), Gaps = 9/312 (3%) Strand=Plus/Plus Query 25591 GCGACCGGCAAGGCTGTTTCGGATACGGTCGCCGAGTTCTCCAAG---CTGGCCGACGAA 25647 || ||||||||||| || ||||| |||||||||||||| |||| ||||||||||| Sbjct 53 GCCACCGGCAAGGCCGTCTCGGAGACGGTCGCCGAGTT---CAAGCGCCTGGCCGACGAG 109 Query 25648 CCGGTCAAAGCCTCGCAACAGCTCAACGAGAAATATCACTACCTGACCGCCTCGGTTTAC 25707 ||| ||| |||||| ||| |||||| | || ||||||| |||||| |||| ||| Sbjct 110 CCGACCAAGGCCTCGGCCGCGCTGAACGAGCAGTACAACTACCTCACCGCCGCGGTCTAC 169 Query 25708 GAGCAGATAGCCGCCCTCGATCAGCAAGGCGATTCGCTGGGTGCCGCCCAACTGGCCATG 25767 || ||||| || || || |||| ||| | | | |||||| | |||||| | Sbjct 170 GACCAGATCCGGGCGCTGGAGGAGCAGGGCAACAAGACCGCCGCCGCCAACCTGGCCGAG 229 Query 25768 GACGCCTATAGCCAG-GCAATGGACGAGCGGGCGAGCCAGATCGTCGAGAACCTGGGCAC 25826 | ||||| ||| | || || | ||||| || | | ||| |||||||| || || Sbjct 230 GCGACCTAT-GCCGGCGCCTTGCAGGAGCGCGCCAAGAACATCAAGGAGAACCTCGGAAC 288 Query 25827 CCTGGAAACCGCTTGGAAGACCGTTGCCGGGGTGGCCAAGGGCGCCTGGGACGAAATGCT 25886 | | || | || ||||||| ||| || | | |||||||| |||||||||| ||||| Sbjct 289 CATTGAGTCTGCCTGGAAGAGCGTCACCAGCGGCGCCAAGGG-GCCTGGGACGCGATGCT 347 Query 25887 CGGCGTGGGCCG 25898 | | | ||||| Sbjct 348 CAACATCGGCCG 359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 117577788480000