Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq28556 104 6e-17 seq2641 104 6e-17 >seq28556 Length=388 Score = 104 bits (114), Expect = 6e-17 Identities = 147/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243 ||| || ||||| || || || ||||| | ||||| || ||| || || | || Sbjct 268 CAAGACCCTCACCGGCAAGACCATCACGCTAGAAGTAGAGTCTTCGGATACCATTGACAA 209 Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||| ||||| || || |||||||| ||| |||||| || | || ||||| Sbjct 208 TGTCAAGTCGAAGATCCAGGACAAAGAAGGCATTCCTCCGGACCAGCAGCGTCTCATCTT 149 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||||||| |||||||||| | || | | ||||||||| | || || ||||| Sbjct 148 CGCCGGAAAGCAGCTGGAAGATGGCCGTACCCTCTCTGATTACAACATTCAAAAGGAGTC 89 Query 206364 TACTCTTCACCTTGTTTTGAGACTTCG 206390 ||| |||||| | || | ||||||| Sbjct 88 TACCCTTCACTTGGTCCTTCGACTTCG 62 >seq2641 Length=263 Score = 104 bits (114), Expect = 6e-17 Identities = 143/198 (72%), Gaps = 3/198 (2%) Strand=Plus/Plus Query 206194 ACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGT-AAAGCA 206252 || || || || ||||| | ||||| ||| ||| || || |||| || ||| | Sbjct 45 ACCGGCAAGACTATCACCCTTGAAGTTGAATCTTCGGATACTATCGACAATGTCAAAACC 104 Query 206253 AAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAA 206312 ||| ||||||| || || || ||| || || ||| |||| ||||| || || || Sbjct 105 AAA--TTCAAGACAAGGAGGGTATTCCCCCCGATCAACAACGACTCATCTTTGCTGGTAA 162 Query 206313 GCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCA 206372 ||||||||||||||| | || | |||||||||||| | |||||||| |||||||| || Sbjct 163 GCAGTTGGAAGATGGTCGAACCCTTGCCGATTACAACATTCAGAAAGAATCTACTCTGCA 222 Query 206373 CCTTGTTTTGAGACTTCG 206390 || ||| | ||||||| Sbjct 223 TCTGGTTCTTCGACTTCG 240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179847787106300