Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025422.1 Length=155997 Score E Sequences producing significant alignments: (Bits) Value seq41062 89.7 5e-13 >seq41062 Length=2478 Score = 89.7 bits (98), Expect = 5e-13 Identities = 165/237 (70%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 19965 GCAAAATCTTCATCTTCTTTGACCAGAAGTTTTAGCATTTGCTGAGTTCCAGCCAAATGA 20024 ||||| ||| ||||||||| || | || ||| ||| ||| || |||| ||| Sbjct 1025 GCAAAGTCTGGATCTTCTTTTTTCATTAAACGTAACATCATCTGGGTTGCACCCAAGTGA 966 Query 20025 AGATTTTCATCTCGGCAAATCAGCTTGATGATATTGGCATTACCAGTCATCAAGCCTTGC 20084 | ||||||||| || ||||| || ||||| || ||||| || ||| | || | Sbjct 965 ATATTTTCATCACGACAAATTAGACGAATGATCTTAGCATTGCCTTCCATTTTTCATT-C 907 Query 20085 TCAGCAAATGCCCAGAAAATTGCAAATGAAGCATAAAAACGAATACCTTCAAGAGCATTG 20144 || ||||| ||| || |||||||||| |||| |||||||||||||||||| || Sbjct 906 TCTGCAAAACTCCATGAACATGCAAATGAAACATAGAAACGAATACCTTCAAGAATGTTA 847 Query 20145 ATAGCATTTAGAGTTCGCCA-AATTTGTTCTTTAAGTTC-TAAAGGTTCTCTCCAAT 20199 || |||| | |||| ||||| || ||||||||| || | ||| || |||| Sbjct 846 ATGCTGTTTAAACAAAGCCATAATTTCTT-TTTAAGTTCATACAAATTCACTACAAT 791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498249552116000