Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025427.1 Length=54506 Score E Sequences producing significant alignments: (Bits) Value seq98447 87.8 6e-13 seq3131 87.8 6e-13 >seq98447 Length=395 Score = 87.8 bits (96), Expect = 6e-13 Identities = 162/230 (70%), Gaps = 11/230 (5%) Strand=Plus/Minus Query 28308 TGGCCTTGAGGGTATCATCGCCAAGCGCAGGGGCGCGCCCTATCGATCCGGCCGGGGCGG 28367 ||| || || || ||| ||| |||||| | ||| ||||| |||||||| ||| Sbjct 267 TGGTCTGGAAGGCATCGTCGGCAAGCGTCTCGATCAGCCGTATCGCTCCGGCCGAACCGG 208 Query 28368 TGACTGGCTCAAAATCAAATGCGTCCAGAGCGACAGCTTCTTCATCGTCGGTTACGAG-- 28425 |||||| | ||| |||||||||| | ||||| |||||| | |||| ||||||||| Sbjct 207 CGACTGGGT-AAAGTCAAATGCGTTGAAAGCGA-AGCTTCATGGTCGTTGGTTACGAGCC 150 Query 28426 ATC-TCGATAGCGGCGAG-GGGTCATATCGGATCGCTGCTGCTCGCTGCCCGCAAGGGCG 28483 ||| ||| || || | | |||| ||| |||||| | | |||||| |||| Sbjct 149 ATCGTCGGTATCGTCTACCGGGT----TCGCCTCGCTGGTATTGGCTGCCTATCGTGGCG 94 Query 28484 ACGACCTGGTCTATGTCGGTTCGGTCGGGACGGGCTTCAAGGAAAGCGAG 28533 |||| || | ||||||| ||||| ||||||||||| | ||||||| Sbjct 93 ACGAGCTCATTCATGTCGGAAACGTCGGCACGGGCTTCAAAG-AAGCGAG 45 >seq3131 Length=1941 Score = 87.8 bits (96), Expect = 6e-13 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 50506 TATGTGGAGCCGTTCGGCGGCTCGGCTTCGGTGCTGCTGCAGAAACCGCGCGCCGTAACC 50565 ||||| || || |||||||| |||| || || ||||| ||||||||||| || | || Sbjct 361 TATGTCGAACCCTTCGGCGGTGCGGCATCCGTTCTGCTTCAGAAACCGCGAAGCGAAGCC 420 Query 50566 GAAATCTATAACGACCTCGATCGGGATCTGGTGAATCTGTTTCGGATTCTGCGCGA 50621 || |||| ||||| || ||| || | |||||||||||||| || |||||||| Sbjct 421 GAGGTCTACAACGATCTTGATGAATATGTCGTGAATCTGTTTCGCATACTGCGCGA 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 174027907144800