Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025436.1 Length=133824 Score E Sequences producing significant alignments: (Bits) Value seq34300 87.8 2e-12 >seq34300 Length=21418 Score = 87.8 bits (96), Expect = 2e-12 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 47428 CTCAAGAATGGTGATGAGTTGTAACCCCGACCCAGATCATAAACTAAGGCAAATTATTGA 47487 |||||||||||| ||| |||||||| || ||||| |||||| ||| || ||||||| Sbjct 8654 CTCAAGAATGGTAATGTCCTGTAACCCAGATCCAGACCATAAAATAAAAGAACTTATTGA 8595 Query 47488 CTGGTACTTGGATGAAGAAGGATACCCCGATCCAGATAAGGATGGAGTACAGAGGTATTT 47547 ||||| || ||||| ||| | || ||| ||| || | |||||| || | || ||||| Sbjct 8594 ATGGTATTTAGATGACGAA-GCTATCCCATTCCCGAGAGGGATGGTGTTAAAAGATATTT 8536 Query 47548 TATTACCCTTGATGGGGAGTTCCAATGGGG 47577 || || ||||| || ||| ||||| Sbjct 8535 CATACGCCAGGATGGAGAATTCATCTGGGG 8506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427432144765500