Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025443.1 Length=52869 Score E Sequences producing significant alignments: (Bits) Value seq27079 196 2e-45 >seq27079 Length=4003 Score = 196 bits (216), Expect = 2e-45 Identities = 244/334 (73%), Gaps = 3/334 (1%) Strand=Plus/Minus Query 36611 TGGCTTTACTCACATCCAGCGACTTAGGAAAACCAGAACCATAAACCCAGTCAATTTGAT 36670 |||||||||||||||||||||| || || || || || || || ||||| ||| || | Sbjct 773 TGGCTTTACTCACATCCAGCGATTTCGGGAAGCCGGATCCGTAGACCCACATAATCTGGT 714 Query 36671 CGCGTATTTCAAACCCTGCTAAACGGATCGCCAGTGTTCCCAGGTCATAGGTACGTGTTC 36730 | || |||||||| ||||| | ||||||||||| || |||| |||||||||||| | | Sbjct 713 CTCGGATTTCAAAGCCTGCCAGGCGGATCGCCAGCGTACCCATGTCATAGGTACGGCTGC 654 Query 36731 CGAAAAAGGCCAACAAGTGACCGCCTGGTTTCAGGACGCGGAAAACTTCTTTCCAGATTG 36790 ||||||| | |||| ||| ||||| ||||| || |||||||| ||||| ||| | | Sbjct 653 CGAAAAACGATAACAGGTGCCCGCCGGGTTTAAGCACGCGGAATACTTCCCGCCACACGG 594 Query 36791 ACGGACCGGGTACAAAACTATCCCAGGTCTTACCCATGAAACCCCCGCCCGTGTGAATAT 36850 |||| ||||| ||||| | |||||||| ||||||||||| ||| || | Sbjct 593 ACGGGCCGGGAACAAACCGATCCCAGGCTTTACCCATGAAGCCCGAACCTTTCACCGGTG 534 Query 36851 AATCATCACCGTTCAACCAGTGGCGTAATACTTCACTCATGTCAGGCTGTTTAC---TCA 36907 ||| |||||| | |||||| | ||||| |||||| || | ||||| | | Sbjct 533 CATCGTCACCGGCTAGCCAGTGTTTCAGAACTTCGGCCATGTCTGGTTCTTTACTGTTGA 474 Query 36908 GGCCATAAGGTGGATCGGTAACTACAGCATCAAT 36941 | || || || || || || ||||| |||||||| Sbjct 473 GCCCGTATGGCGGGTCAGTGACTACGGCATCAAT 440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 168797612586600