Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025452.1 Length=155346 Score E Sequences producing significant alignments: (Bits) Value seq31280 170 2e-37 >seq31280 Length=10079 Score = 170 bits (188), Expect = 2e-37 Identities = 296/425 (70%), Gaps = 4/425 (1%) Strand=Plus/Plus Query 26857 CAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATGCGACGTTCGCGGTT 26916 |||||||| |||||| ||||| ||| | ||||||||| ||| ||||| ||||||| Sbjct 1320 CAGGCGCTGGTACATCATTTTGTTGAGCTGCACACCGTAGTCCATGTGACGTACGCGGTT 1379 Query 26917 CTCTTCTGTTCCACGGTTGTTCTTCAGGACAACGACGTCATCGAACTGGTAG-TGCCACA 26975 |||| ||||||||||| |||||||| | | | || | || || ||||||| Sbjct 1380 ACCTTCCACACCACGGTTGTTTTTCAGGACTAACAGGCTTTCTA-CTTCCAGATGCCACA 1438 Query 26976 GAGGGATGTACCCTGTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCG 27035 || | || |||||||| ||||| || | ||||||||| || || || || | || Sbjct 1439 TCGGATAGAACAGCGTCGCTGCGCCGCCACGGACGCCGCCCTGCGAACAGGATTTCACCG 1498 Query 27036 CCCCAGTGAGATACTTGATGAACGGGATCAGGCCTGTATGAACCATCTCTCCGCCGCGAA 27095 | || | |||| ||||||||| || ||||| | || |||||||||| Sbjct 1499 CTGTCTGGAAGTGCTTGTAGAACGGGATACAACCGGTATGGAAAGCTTCACCGCCGCGAA 1558 Query 27096 TAGGACTACCAATACCACGGAT-TGCCCCGAAGTCAAAACCGATACCAGCGCGTTTGGAC 27154 | || || || | | ||||| | |||| || || ||| ||||| ||||||| || Sbjct 1559 TCGGGCTGCCCAGCGCGCGGATACGACCCG-CGTTAATACCAATACCTGCGCGTTGTGAA 1617 Query 27155 ACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTG 27214 || || | || || | ||| || |||||||| || |||||| |||| ||| | Sbjct 1618 ACGTATTTCACAATAGCGCTGGAGGTCGCGTTGATGGAATCCAGGCTGTCGCCACATTCA 1677 Query 27215 ATCAACACACATGAGCTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTT 27274 |||| ||||| ||||||||||||||||| || ||||| || || | |||||| || || Sbjct 1678 ATCAGGACACAGGAGCTGAACTGACGGGTTGGCGTACGCACTCCCGACATGATTGGCGTC 1737 Query 27275 GGAAG 27279 || || Sbjct 1738 GGCAG 1742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496169745128000