Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025470.1 Length=139004 Score E Sequences producing significant alignments: (Bits) Value seq79536 105 6e-18 >seq79536 Length=725 Score = 105 bits (116), Expect = 6e-18 Identities = 151/209 (72%), Gaps = 9/209 (4%) Strand=Plus/Minus Query 47396 TTCGTAGGACATCCCCTCCACTAAAAGCAGCGGGTGGTTTGTTTAGTGAAGCTAAGAAGC 47455 ||||||| || || || ||||||| | || ||||| | |||| |||||||| || | Sbjct 725 TTCGTAG-ACTTCACCACCACTAAGGGGTGCAGGTGGACTATTTACCGAAGCTAAAAAAC 667 Query 47456 TTTAC-CAACCACTTGGTACTAGAGTTCGAGAGAAAGATATGGAAATCTTGTTTGGTGGG 47514 |||| ||||| || | | ||| |||| || |||||||||||||| | |||| Sbjct 666 TTTATTCAACC-CTGAGACCAAGAATTCGTGAAAAAGATATGGAAATTATCTTTG----- 613 Query 47515 GATGGAAATAAGAAAGGTGGTAATTTAAAATTTACACATCTCGAACATGAGAGTGATGCT 47574 | ||||| | |||||||| | |||||||| || || | ||| | || |||||||| Sbjct 612 -ACGGAAAAACAAAAGGTGGCACATTAAAATTCACTCACTTAGAAAACGAAGGTGATGCT 554 Query 47575 GAAGGTAACCATCAAGGACTTCAGTACTC 47603 ||||||||||| || || | ||||| || Sbjct 553 GAAGGTAACCACCAGGGTTTGCAGTATTC 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 443960519632000