Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025822.1 Length=42544 Score E Sequences producing significant alignments: (Bits) Value seq60183 87.8 5e-13 >seq60183 Length=833 Score = 87.8 bits (96), Expect = 5e-13 Identities = 220/324 (68%), Gaps = 29/324 (9%) Strand=Plus/Minus Query 5410 CAATCGGTGAGGTTGTAGTAGCTGCAAGAGCAGGTATGAAATACATTAAGGAAGT---TT 5466 |||| || |||||||| ||||| || | || |||||||| |||||||||| || | Sbjct 323 CAATTGGCGAGGTTGTGGTAGCAGCCCGTGCTGGTATGAAGTACATTAAGGCCGTAACTA 264 Query 5467 GCTCTGCTATTGCTAAGGATAACAAGCCGCTTGAGTGGATGACTCCTACTGGTTTCATTG 5526 | | | |||| |||| ||||||||||||||| |||| || |||||||||| ||| Sbjct 263 ACACAG---TTGCCAAGGCTAACAAGCCGCTTGAATGGACTACACCTACTGGTT---TTG 210 Query 5527 TTAAGCAAGCTGTTTACGAAGTAAAAGAA---GATAAGCG---CATCAAGACACAGATGC 5580 | || || | ||| | | ||| | ||| || || | || ||| | Sbjct 209 T------AGTGCTTCAGGAAATCTATGAAACCGCTAATCGTCAGATTGACACTCAGCTTA 156 Query 5581 TAGGTGAAACTTTCTTCCGTACCTCGGT--ACGTACAGATAAGATAGACCCTCGCAGAAT 5638 | ||| | ||| || || || || || ||| || ||||| || || | | || Sbjct 155 TGGGTAAGACTAAGTTTGTTA--TCAGTACACCTACTGACAAGATGAACTTTCACCGCAT 98 Query 5639 GGCTAGC-TCTGCCGCTCCTAACTTTGTTCATAGTATGGATGCAAGCCA-CTTAGTACTG 5696 || || | ||| ||||||||||||||||| ||||||||||| ||||| |||| || | Sbjct 97 GGTTAACAGCTG-TGCTCCTAACTTTGTTCACAGTATGGATGCGAGCCATCTTACTA-AG 40 Query 5697 GCTGTTTGTGCCTTTGAAGACAAC 5720 ||||| ||| ||| | ||||| Sbjct 39 GCTGTAAATGCTTTTCATAACAAC 16 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135808735791600