Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq79110 96.9 3e-15 seq28556 89.7 5e-13 >seq79110 Length=913 Score = 96.9 bits (106), Expect = 3e-15 Identities = 200/298 (67%), Gaps = 0/298 (0%) Strand=Plus/Minus Query 148111 TAGATGCCGTCGATGCTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGA 148170 ||||| || || |||||||| | || | | ||| || ||| || || |||| ||||| Sbjct 906 TAGATACCATCAATGCTGTCCTCCTTCATGTCAATCAGAAAGCAAGATGACATCTGCGGC 847 Query 148171 ATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATC 148230 | || || || |||||| || || || || ||||| | ||||| ||| Sbjct 846 GAAGGGGTGCCGGCGTTGAAAAGCGTTGGGGAGGCATGAGTAAAGTACTTTTGTGACATG 787 Query 148231 ATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGC 148290 | ||||| || || || | |||||| || ||||||||||| || | ||||| ||| Sbjct 786 TAGTCGTACGTTTCGATGGCCTTTTCGATATCCTCGCCGTGAATACCGACAGCGACACGC 727 Query 148291 ATGAGCATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTT 148350 |||| |||||| ||||| || |||||||| | ||| || ||| || || | Sbjct 726 ATGATCATGTGTTGTGGGCGCTCGGCAACCTTGCCGTTTATGCGGAGGAGGTAGGATCTC 667 Query 148351 TCGAGGGTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGCCG 148408 ||||| || ||| | |||||| ||| || | || || | ||||| ||| |||| Sbjct 666 TCGAGCGTCTTGAAGCCAAAGAACTGATAGTTGAAGTCACGGTCGTAGACGACAGCCG 609 >seq28556 Length=388 Score = 89.7 bits (98), Expect = 5e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| |||||||||||||| || | |||||| |||||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| |||| |||||||| || || ||||| ||||||||||| || Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || | | || | ||||| | | ||| ||||| | ||| | || || Sbjct 194 ATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTG 253 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || | ||| || ||||| Sbjct 254 CCGGTGAGGGTCTTGACGAAGATTTGCAT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475834919508000