Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_026587.1 Length=86246 Score E Sequences producing significant alignments: (Bits) Value seq29230 96.9 2e-15 seq27013 91.5 8e-14 >seq29230 Length=2423 Score = 96.9 bits (106), Expect = 2e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 50214 GCGCCCTGGAGTCCTGCTCCTGGGGAATGTTCCAGATCATGGGCTACCACTGGAAGCTGA 50273 |||| |||||||| ||| |||||| |||||||| ||||||||||||||||| || Sbjct 1219 GCGCGCTGGAGTCGTGCAGCTGGGGCCTGTTCCAGGTCATGGGCTACCACTGGCAGGACC 1278 Query 50274 TGGGGTACCCTACCCTTCAAGCTTTCGTAAACGCCATGTACGCCAGCGAAGGAGCCCAGA 50333 |||| || | | | | || | ||||| | | |||| | ||||||||| | | ||| Sbjct 1279 TGGGCTATGCCAGCGTCCAGGACTTCGTCACCCGCATGCAGGCCAGCGAAAGCGAGCAGC 1338 Query 50334 TGGACGCCTTCTGCCGGTTCATCAAGGC 50361 ||||||| ||| ||| ||| ||||||| Sbjct 1339 TGGACGCATTCGTCCGCTTCGTCAAGGC 1366 >seq27013 Length=32742 Score = 91.5 bits (100), Expect = 8e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 69478 CACAAGCAGATTGTCAACCGGGTGCTAGAACCCTTCCAGATGATGAAAACGGTAGTGACT 69537 ||||| |||||||| ||||| || | ||||| ||||||||||||||||| || |||| Sbjct 8916 CACAAACAGATTGTGAACCGCTTGGTTGAACCTTTCCAGATGATGAAAACTGTGATGACA 8975 Query 69538 GCCACCGAGTGGGAAAACTTCTACTGGCTCCGTGACCATGAAGACGCTCAGCCGGAGTTT 69597 || || ||| ||| ||||||| |||| | ||| | ||||| || ||||| ||| || Sbjct 8976 GCAACAGAGCTGGATAACTTCTTCTGGTTGCGTTTGGACGAAGATGCACAGCCTGAGATT 9035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275424321888100