Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26]
130,300 sequences; 87,617,276 total letters
Query= NC_026600.1
Length=66181
Score E
Sequences producing significant alignments: (Bits) Value
seq54636 98.7 4e-16
seq54635 82.4 3e-11
>seq54636
Length=518
Score = 98.7 bits (108), Expect = 4e-16
Identities = 160/227 (70%), Gaps = 10/227 (4%)
Strand=Plus/Minus
Query 42320 CATCGCGGCTTACCTCGCCAACATCGGTGTCGAATCCGGTGGACTGGTGAGTCTGGTGGA 42379
||| || || ||| ||||| | |||| ||| ||||| ||| | ||||||||
Sbjct 431 CATGGCTGCCTACATCGCCCAGTGCGGTCACGAGTCCGGCAAGCTGACCCGCCTGGTGGA 372
Query 42380 GAATCTCAACTACAGCGCTCAAGGACTGGCCAACACTTGGCCGCGCCGGTATGCCGTGGA 42439
|| |||||||||||||| || || |||||||| || ||||| |||| || ||||||||
Sbjct 371 AAACCTCAACTACAGCGCCCAGGGCCTGGCCAAAACCTGGCCCAGCCGCTACGCCGTGGA 312
Query 42440 TCCGCGCGTCCGTCCATATG-TACCGAATGCTCTGGCGAACCGCCTGGCTCGCAACCCGG 42498
|||||| | ||| | || ||||| | ||| ||||| ||||||| ||||
Sbjct 311 TCCGCGTGCCCG-GGAGCTGAGGCCGAACGAGTTGG----CCGCCAGGCTCGCGCGCCGG 257
Query 42499 TC----GCCATCGCCAACAACGTGTACGCTGACCGCATGGGCAATGG 42541
| || ||||||||||||| || || |||||| || |||||
Sbjct 256 CCGGAAGCGATCGCCAACAACGCCTATGCCAACCGCAACGGGAATGG 210
>seq54635
Length=814
Score = 82.4 bits (90), Expect = 3e-11
Identities = 77/98 (79%), Gaps = 0/98 (0%)
Strand=Plus/Minus
Query 42350 CGAATCCGGTGGACTGGTGAGTCTGGTGGAGAATCTCAACTACAGCGCTCAAGGACTGGC 42409
||| ||||| | |||| | ||||| ||||| || ||||||||||| || || |||||
Sbjct 223 CGAGTCCGGCGAACTGACCCGCCTGGTCGAGAACCTGAACTACAGCGCCCAGGGCCTGGC 164
Query 42410 CAACACTTGGCCGCGCCGGTATGCCGTGGATCCGCGCG 42447
||||| |||||| ||||||| ||| | || |||||||
Sbjct 163 CAACAACTGGCCGAGCCGGTACGCCATCGACCCGCGCG 126
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 211318286198600
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |