Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_026610.2 Length=56637 Score E Sequences producing significant alignments: (Bits) Value seq25805 93.3 2e-14 seq25820 86.0 2e-12 seq97599 80.6 1e-10 >seq25805 Length=882 Score = 93.3 bits (102), Expect = 2e-14 Identities = 136/190 (72%), Gaps = 2/190 (1%) Strand=Plus/Minus Query 20602 CCATTGCGAACACCATATCGCACCGATCATTGGTCTGG-CCACAGTAGCCTACATCCCGA 20660 ||| ||||||||||| || || |||||||| || || |||| || | |||| | ||| Sbjct 562 CCACTGCGAACACCACATGGCGCCGATCATCGGCAAGGTCCAC-GTCGGCTACCTGCCGC 504 Query 20661 ACGGGAAGATCGTCGGCCTGTCCAAGATCACGCGCTTGGTCGATGCCTTCGCCCGCCGCC 20720 ||| ||| | || ||| | |||| | ||||| ||||||| |||| || || ||| Sbjct 503 GCGGCAAGGTGGTGGGCATCAGCAAGCTGGCGCGCGTGGTCGAGGCCTATGCGCGGCGCT 444 Query 20721 TACAAGTGCAGGAGCGTTTGACCGATCAGATTGCGCAGACTATGGTGGACGAGCTGGAGC 20780 | || ||||||||| |||||| ||||| || ||| || ||||| |||| ||| Sbjct 443 TCCAGGTGCAGGAGAAGATGACCGCGCAGATCGCCCAGTGCATCCAGGACGTGCTGCAGC 384 Query 20781 CGCTTGGTGT 20790 |||| || || Sbjct 383 CGCTGGGCGT 374 >seq25820 Length=1184 Score = 86.0 bits (94), Expect = 2e-12 Identities = 164/237 (69%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 20563 TGACGAGATGGTGGTGGTCAAGGATATTCCATTCTTCTCCCATTGCGAACACCATATCGC 20622 ||||||||| ||| || | ||||| || || ||| || ||||||||||| || || || Sbjct 300 TGACGAGATCGTGCTGCTGAAGGACATCCCGTTCCAGTCGCATTGCGAACATCACATGGC 241 Query 20623 ACCGATCATTGGTCTGGC-CACAGTAGCCTACATCCCGAACGGGAAGATCGTCGGCCTGT 20681 |||||||| || ||| |||| | || ||| | ||| | | |||||||| | | Sbjct 240 GCCGATCATCGGCAAGGCGCACA-TCGCGTACCTGCCGCGCAACCATGTCGTCGGCATCT 182 Query 20682 CCAAGATCACGCGCTTGGTCGATGCCTTCGCCCGCCGCCTACAAGTGCAGGAGCGTTTGA 20741 ||||| | |||| || || | | || ||||| || | || ||||||||||| ||| Sbjct 181 CCAAGCTGGCGCGGGTGCTCCACGGCTATGCCCGGCGGTTGCAGGTGCAGGAGCGGCTGA 122 Query 20742 CCGATCAGATTGCGCAGACT--ATGGTGGACGAGCTGGAGCCGCTTGGTGTTGCAGT 20796 ||| | || ||| |||| || | ||| ||| ||||||| || || || || Sbjct 121 CCG--CCGAGGTCGCCGACTGCATCTGGAACGGGCTCAAGCCGCTCGGCGTCGCGGT 67 >seq97599 Length=510 Score = 80.6 bits (88), Expect = 1e-10 Identities = 119/169 (70%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 20566 CGAGATGGTGGTGGTCAAGGATATTCCATTCTTCTCCCATTGCGAACACCATATCGCACC 20625 |||||||||| |||||||| | || | | ||||| ||||||||||| || || Sbjct 220 CGAGATGGTGCTGGTCAAGAACATCGAGCTGTACTCCCTGTGCGAACACCACATGCTGCC 279 Query 20626 GATCATTGGTCTGGCCACAGTAGCCTACATCCCGAACGGGAAGATCGTCGGCCTGTCCAA 20685 |||| || |||| || |||||||| || | ||| ||| | | || |||||||| Sbjct 280 CTTCATCGGCAAGGCCCATGTCGCCTACATGCCCAGCGGCAAGGTGCTGGGGCTGTCCAA 339 Query 20686 GATCACGCGCTTGGTCGATGCCTTCGCCCGCCGCCTACAAGTGCAGGAG 20734 | | ||||| | ||||| |||||||| ||||| || | |||||| Sbjct 340 GGTGGCGCGCATCGTCGACATGTTCGCCCGTCGCCTGCAGATCCAGGAG 388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180836555711400