Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027296.1 Length=53721 Score E Sequences producing significant alignments: (Bits) Value seq5034 192 2e-44 >seq5034 Length=373 Score = 192 bits (212), Expect = 2e-44 Identities = 233/316 (74%), Gaps = 6/316 (2%) Strand=Plus/Minus Query 12988 TCAACCGCACGGTTTACCCGGACATTCAGTACCCGGGCCTGATCCCTGTGGACACCTCGG 13047 ||||| || || ||||||||||| ||||| |||| || | || ||||||||||| | Sbjct 324 TCAACGCCATCGTGTACCCGGACATCCAGTATCCGGAGCTCGTACCGGTGGACACCTCCG 265 Query 13048 CCAATCCCTTCACCCAGACCGTTGTCTACTACAGCTCCGACATGTTCGGTAAGGCTGACT 13107 ||| |||| || |||| || ||||| | ||| |||| || |||||| || | || Sbjct 264 CCAGCCCCTGGGCCAAGACGGTCACCTACTTCTCCTCGGACAAGTACGGTAAAGCCGGCT 205 Query 13108 GGATCAACGGCAACGCCGACGACATCCCGATTGCCGGCACCGAGCGCACCAGCTTCAAGA 13167 ||||||| ||||| ||||||||||| || ||||||||||||| | | ||| ||| Sbjct 204 GGATCAATGGCAATGCCGACGACATTCCCCGCGCCGGCACCGAGCTGTCGAAGTTCGAGA 145 Query 13168 CCTCGGTCTACACTGCTGCAATCGGTTACGGCTTCGGCTGGGAGGAAGTCAATCAGGC-- 13225 ||||||| ||||| || | ||||| ||||||| |||| ||||| ||| ||||| Sbjct 144 CCTCGGTTTACACCGCAGGTATCGGCTACGGCTACGGCCTCGAGGACATCAGCCAGGCTC 85 Query 13226 -GATGCGCGATGGCGTCAACCTCCAGACCGAGGATGCCGCGGCCGCCCGTCGCGCCTACG 13284 ||||| ||| ||||||| | |||| || ||| | || || ||||| ||||||| Sbjct 84 AGATGC---TGGGCTACAACCTCGACGCCGAAGAGGCCTCCGCGGCTCGTCGTGCCTACG 28 Query 13285 AAGAGATGGTTGACCG 13300 | |||||||| ||||| Sbjct 27 AGGAGATGGTCGACCG 12 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 171519793993800