Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027332.1 Length=98170 Score E Sequences producing significant alignments: (Bits) Value seq51525 89.7 3e-13 seq56781 84.2 1e-11 >seq51525 Length=844 Score = 89.7 bits (98), Expect = 3e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 17683 TAGCTGAGATGGATTAGCGCTACCCTGAAGAGGTTGAGAGGTTGGATCGTTACCAACATT 17742 || |||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||| | Sbjct 95 TAACTGAGATGGATTAGTGCTACTCTGAAAAGGTAGAGAGGTTGGATCGTTACCAACAGT 36 Query 17743 GTGCACCAAATT 17754 || ||||| || Sbjct 35 TTGGACCAATTT 24 >seq56781 Length=1399 Score = 84.2 bits (92), Expect = 1e-11 Identities = 88/116 (76%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 67115 CATAAACAAACAGCTAATCGTTTGCTTGAACCTTTTCAGATGATGAAGACTGTCATTACT 67174 |||||||| | | || |||||| | ||||| || |||||||||||||||||||| || Sbjct 65 CATAAACAGATTGTGAACCGTTTGGTCGAACCGTTCCAGATGATGAAGACTGTCATGACA 124 Query 67175 GGAACTGATTGGGATAACTTCTTCAATTTACGTATTCATCCAGATGCCCAGCCAGA 67230 | ||| || ||||||||||||| |||||| | || |||||| || || || Sbjct 125 GCAACAGAACTGGATAACTTCTTCTGGTTACGTTTAGATGAAGATGCACAACCTGA 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 313520527697300