Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027335.1 Length=145518 Score E Sequences producing significant alignments: (Bits) Value seq36863 82.4 7e-11 >seq36863 Length=1032 Score = 82.4 bits (90), Expect = 7e-11 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Minus Query 107517 GAGTCAGGTTACCCATATATTATGAATGTTAGTACTGTAAATAAAGCCAATCCTATTGAT 107576 || |||||||| ||||| |||||| ||| ||| || ||| || || |||||| | Sbjct 917 GAATCAGGTTATCCATACATTATGTATGAAGATACAGTTAATCGTGCTAACCCTATTAAG 858 Query 107577 GGCAAAATCATTATGAGTAATTTATGCAGTGAAATATTACAGGTACAGACACCATCTAAG 107636 || ||||| | |||||||||| | ||| ||| || |||||||| | ||||| ||| Sbjct 857 GGTAAAATTAATATGAGTAATCTTTGCTCTGAGATCCTACAGGTAAATACACCTTCTT-- 800 Query 107637 CTAAATGA--TGAACAAGTAT-ACGAAGAGTTAGGTACAGACATTAGCTGTAATTTAGGT 107693 ||| | | ||| || | | | | || ||||||| ||| ||| |||||||||||| Sbjct 799 CTATGTCAACTGA-CATGACTTATCAGGAATTAGGTAAAGATATTTCTTGTAATTTAGGT 741 Query 107694 TC 107695 || Sbjct 740 TC 739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 464771368664000