Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027341.1 Length=130008 Score E Sequences producing significant alignments: (Bits) Value seq30831 334 6e-87 >seq30831 Length=459 Score = 334 bits (370), Expect = 6e-87 Identities = 307/382 (80%), Gaps = 7/382 (2%) Strand=Plus/Plus Query 92170 TTGTG-CTTCGCTT--TGACTTGGCATCCAAGGAGTTGCAATTGAACCAAATTCTTGTTT 92226 ||||| ||||||| ||| |||||| | ||||| || ||| || ||||||||| Sbjct 81 TTGTGGCTTCGCTAGCTGA--TGGCATGTATGGAGTGGCGATTTCGCCTTGTTCTTGTTT 138 Query 92227 TGGTTTTCTAACTCTAACTGTGAAACTACCTTCACTTGGACCAGTAAACTTAGTCATGAA 92286 ||| ||||||| || | ||||||||||||||||| ||||||||||| |||||||| || Sbjct 139 TGGATTTCTAATCCTTATCGTGAAACTACCTTCACTCGGACCAGTAAATTTAGTCATAAA 198 Query 92287 CAATGCTTCTGTATTGACAGCAGGGTCTACATAAGGAGGTATCGTTGAAGTTTTTGTTAT 92346 | ||||||||| |||| ||| |||||| |||| |||||||||||||| |||| |||||| Sbjct 199 GATTGCTTCTGTGTTGATAGCGGGGTCTTCATACGGAGGTATCGTTGACGTTTGTGTTAT 258 Query 92347 TCTTATCCATTGGTTCAGCATTTGACTAGGGTCTCTGGGTAAATCAATAGCACATATTTG 92406 | ||||||||||||||||||||| |||||||||| | ||||| |||||| ||| || | Sbjct 259 TTTTATCCATTGGTTCAGCATTTTACTAGGGTCTTTAGGTAATTCAATAAAACAAATACG 318 Query 92407 CTTATAAGAGCTTATTCCTCCACCAGCACTGTATCGTTGACCAATCCAGAACTCAGTAAT 92466 ||| | ||| || |||||| ||| | ||||||| ||||||||||| ||||| || Sbjct 319 CTTCCATGAGTATAATCCTCCGCCATGAGTGTATCGCTGACCAATCCAAAACTCGTCAAG 378 Query 92467 AGTCGTTCCAGCTGGAAGATTCCAACTTGTAAACATAACATCCATACT-CATTGTGTAAT 92525 | |||||||| || |||||||||||||| |||||||| ||||||| ||||||||| | Sbjct 379 ATGTGTTCCAGCAGGGAGATTCCAACTTGTGAACATAAC-GCCATACTACATTGTGTACT 437 Query 92526 TATCGTTAGGTTTATAATCCCT 92547 ||||| ||||||||||| || Sbjct 438 TATCGCCGGGTTTATAATCTCT 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415240336532700