Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027356.1 Length=108065 Score E Sequences producing significant alignments: (Bits) Value seq33499 569 1e-157 >seq33499 Length=26748 Score = 569 bits (630), Expect = 1e-157 Identities = 635/848 (75%), Gaps = 0/848 (0%) Strand=Plus/Minus Query 29935 TTATTTGTTACGCATGTCCATGATCATCTGGCCATCGTAACCAGTTCCCACAACTGTTTG 29994 |||||||||||| ||||| |||| || || ||||| || || | ||||||||| Sbjct 24100 TTATTTGTTACGAGCATCCATAATCAACTTACCTTCGTAGTCACCACCAATAACTGTTTG 24041 Query 29995 CGGTACACCACCTTGATACTTCTGAGCACGAATCATTTCAACTTCTAGTTGTTTCCAACG 30054 |||||||||||||| || |||| |||||| ||||||||||||| |||||||||||||| Sbjct 24040 TGGTACACCACCTTGGTATTTCTCAGCACGTTTCATTTCAACTTCGAGTTGTTTCCAACG 23981 Query 30055 AATCATCTCAGGAGTAATGGTACGTTGCAGAGCGGCGTTAGCCTCAGCTTCTTTCTTAGC 30114 ||||||||| ||||| || || |||| | |||||| ||||||||||| | ||| Sbjct 23980 AATCATCTCTGGAGTGATTGTTTTCTGCAACACACTGTTAGCTTCAGCTTCTTTTTGAGC 23921 Query 30115 TGCGTACAGTTTAGCATCTGCATCACGTTCGTTTGCAATAGCTTGGTTGTTACGAGCTTC 30174 || || | ||||||||||||||| ||||||||||| |||| || ||||| ||||| Sbjct 23920 AGCATATAATTTAGCATCTGCATCTCGTTCGTTTGCCTGGGCTTCATTATTACGGGCTTC 23861 Query 30175 ACGATCTGCTTCTGCTTGTTTAACCTTCTGCTGTGCTTCTTGTTCAACACGAGCCAACTC 30234 ||||| || ||||| | ||||| ||||||| ||||| | || || ||| || Sbjct 23860 TCGATCAGCCTCTGCCTTCTTAACTGCTTGCTGTGTTTCTTTAGCTACTCGGTCCAGATC 23801 Query 30235 AGCTTTCGCAGCATTAACTTGTTCTTCACGAACTTTGGTATTCTGTACCTGTTCCATGAT 30294 ||| | || || ||||| ||||||||||||| || ||||| |||||| | |||||| Sbjct 23800 AGCCTGTGCTGCGTTAACCTGTTCTTCACGAATCTTTGTATTTGTTACCTGCTTCATGAT 23741 Query 30295 TACAGGCGGCAAAGTAATATCCTGAAGGAACACTTGCTTAACTGTGTAACCATAAGGGCG 30354 |||| ||||| || ||||| || | ||| | || || || || ||||||||||| || Sbjct 23740 TACATCAGGCAAGGTGATATCTTGCAAGAAGATTTCTTTTACAGTATAACCATAAGGACG 23681 Query 30355 TGCATACTCTTCAACTTCCTGTTGAATTGCAGTTTGTAATTGAGCCTGAATTTTAGCATC 30414 ||| || |||||| ||| || | || | || || || |||||||| | ||| | Sbjct 23680 TGCGTAGGCTTCAATTTCAGCTTTTACTGAATCCTGCAACTGCGCCTGAATCTCAGCGTT 23621 Query 30415 AAACAAATCTTGTGCTTTAGGAACAGACTTGCCGAACTCACGAATAGTAGACAGTAATTT 30474 |||||||| |||||||| || || || || || ||||| || | ||| || | | || Sbjct 23620 GAACAAATCCTGTGCTTTCGGGACTGATTTACCAAACTCTCGGACAGTGGATAAAAGCTT 23561 Query 30475 TTCAGTTACATATTTGTCTAACGCTTGATCCTGAGTACCTGCATTAATACGGTTAATCGG 30534 || |||||||| || | ||||| || ||||| ||||||||||| ||||| || || Sbjct 23560 TTGCTCAACATATTTATCCAGAGCTTGCTCTTGAGTGCCTGCATTAATTCGGTTCATAGG 23501 Query 30535 TGCCTTAGAACCATCAAATTGTAACATAACAGTCAGGTCAACAGTGGATTTAAACTTATC 30594 |||||||||||||||||| || |||||||| |||| || || || |||||||||||||| Sbjct 23500 TGCCTTAGAACCATCAAACTGCAACATAACGGTCATATCCACTGTTGATTTAAACTTATC 23441 Query 30595 CTGACTAGGAACCTGAAGTTTATCTAATTTTACAGCAATATCTTTTGTACTAAAAGTATC 30654 |||||| || || || | |||||| || ||| |||||||||||||| ||||| || Sbjct 23440 CTGACTCGGTACTTGCAATTTATCATATGTTATTTTGATATCTTTTGTACTGAAAGTCTC 23381 Query 30655 GAAAGATGCAAAGGGGTTTACAAGATGGAAGCCAGGTAATACTGGGTTAGGATCTACTTT 30714 || |||||| ||||| || | |||||| || || ||| || ||||||| ||||| Sbjct 23380 AAAGCTTGCAAATGGGTTAACCACATGGAACCCTGGCTTTACAGGATTAGGATTAACTTT 23321 Query 30715 ACCAAGAAATGTTTGGGTTTTAACCGTACCATCGGAAACAATAGTATATGAATTAAAAGC 30774 ||| | ||| ||||| ||||| || |||||||| || || |||| ||||| | ||| Sbjct 23320 ACCCATAAAGGTTTGTGTTTTTACTGTACCATCTTGCACGATGATATAGGAATTTAGAGC 23261 Query 30775 TAGGATTA 30782 | ||||| Sbjct 23260 CAAGATTA 23253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 345134244275800