Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027360.1 Length=87603 Score E Sequences producing significant alignments: (Bits) Value seq66202 104 1e-17 >seq66202 Length=972 Score = 104 bits (114), Expect = 1e-17 Identities = 188/271 (69%), Gaps = 3/271 (1%) Strand=Plus/Minus Query 31176 ATCTGTTTTAGGGTCTTTTGCAAGCATAATCTCTTTACCACCAATGCTTGCAAGAGTTGC 31235 ||| ||||| || ||||| | || ||||||| |||| ||||| ||| | |||||| Sbjct 924 ATCAGTTTT-GGCTCTTTACTCACCAGGATCTCTTCACCATCAATGATTGAACCAGTTGC 866 Query 31236 TTTGACA-GCAAATGCAAAGGTGTCACGAGTCATGTACTGGTAAGTGTAAGAGCCTACAC 31294 ||| ||| ||||| ||||||||||||| || |||| | |||||| || || | || Sbjct 865 TTT-ACATGCAAAACCAAAGGTGTCACGTGTATTGTAGTTGTAAGTATAGCTACCAATAC 807 Query 31295 CAAACACTACGTTAGAGCTTGCAAAACCCATTTCATACAGACGCTTCAGGATTTCGTTTG 31354 | || || | ||| ||||||||| | | | || || | | |||||| | | Sbjct 806 CGAATACAATATTACTTGATGCAAAACCTTTAGCTTCCAAGCGTTCAAAGATTTCAGTGG 747 Query 31355 CACGTTCCAGCGTGATAGAGTCACCATAGATAAGGCCGATATGCTCATCCATTACCTTAA 31414 | |||| ||| ||||| || ||||||||||| | || | || ||| | ||||| Sbjct 746 CGCGTTTCAGAGTGATTGAATCACCATAGATTACACCAACGTGTGTATCAAGAACCTTGT 687 Query 31415 ACCCTTTAGAGTTAATAGTTCCCCCAAAGAT 31445 | ||||||||||||| || |||||||| Sbjct 686 AACCTTTAGAGTTAACTTCACCACCAAAGAT 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 279759826021200