Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027368.1 Length=33828 Score E Sequences producing significant alignments: (Bits) Value seq39113 93.3 9e-15 seq38764 84.2 5e-12 >seq39113 Length=4314 Score = 93.3 bits (102), Expect = 9e-15 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 9515 ATAGACCCAGCCATAGGCACCGCCACAGGCTACATCGCCAAATACATTTCTAAAAACATC 9574 || || ||||| | ||||| ||| |||||||| ||||| |||||| | | |||||||| Sbjct 2219 ATTGATCCAGCAAAAGGCAGCGCGACAGGCTATATCGCTAAATACGTAGC-AAAAACATT 2161 Query 9575 GACGGCTACGCGATGGATGACGAATTCTCAGACGAAACAGGCAAGCCAGTGAAAGAAATG 9634 || ||||| ||| | || | ||| | |||| || ||||| |||| |||| | Sbjct 2160 GATGGCTATGCGCTCGAAGGCGAGCGGGATCATGAAAGCGGAAAGCCGCTGAAGGAAACG 2101 Query 9635 GCGAAAAACGTTTCAGCATGGAAAAGCCGCTGGAACGTGCGCCAATACCAGTTCTTTGGT 9694 |||| ||| || || ||| ||||||| | ||||| | ||||| |||| Sbjct 2100 GCGATGGCCGTCTCGGCCTGGGCGGCCCGCTGGCGTATCCGCCAGTTTCAGTTTATTGGC 2041 Query 9695 GGCGCTCCCGTCACCACATATCGAGAACTGCGCCGC 9730 || || |||||||| ||||| |||||||||||| Sbjct 2040 GGTGCACCCGTCACGGTTTATCGCGAACTGCGCCGC 2005 >seq38764 Length=714 Score = 84.2 bits (92), Expect = 5e-12 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 15462 CCAGTCCAGAACGGGTAAGCGGGGTGCATTTTGGTTGAAGGGGTGGAAAAGTACGTCTTG 15521 |||| ||||||||| || ||| |||| | | | || || ||||||||||| || | | Sbjct 580 CCAGACCAGAACGGATAGGCGCTGTGCGTGAGGCTGGACGGCGTGGAAAAGTAGGTTTCG 639 Query 15522 CGCCACTTCTTATGCGTGGCCATCGCTGAGGCGACTTTGTTCAGCTCGTCAAACTTGCCG 15581 ||||| ||||| ||| ||||| | ||||||||||| | ||| || | ||| || Sbjct 640 CGCCATTTCTTGTGCAGCGCCATGCCCGAGGCGACTTTCTGCAGTTCCTGAAATTTCGGT 699 Query 15582 ATCCAGAAATACTC 15595 ||||||||||| || Sbjct 700 ATCCAGAAATATTC 713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107960692194000