Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027369.1 Length=86231 Score E Sequences producing significant alignments: (Bits) Value seq66202 105 4e-18 >seq66202 Length=972 Score = 105 bits (116), Expect = 4e-18 Identities = 184/267 (69%), Gaps = 7/267 (3%) Strand=Plus/Plus Query 72520 AACTCTAAAGGTTTTAAGGTACTGGATGAGCACATTGGACTTATCTATGGTGACTCTATC 72579 ||||||||||||| ||||| || ||| ||| |||| | ||||||||||| || ||| Sbjct 674 AACTCTAAAGGTTACAAGGTTCTTGATACACACGTTGGTGTAATCTATGGTGATTCAATC 733 Query 72580 ACGTTGGAACGTGCAAACGAAATCCTGAAGCGTCTGTATGAAATGGGTTTTGCAAGCTCT 72639 || || |||| || | |||||| | | || || | | | ||||||||| | Sbjct 734 ACTCTGAAACGCGCCACTGAAATCTTTGAACGCTTGGAAGCTAAAGGTTTTGCATCAAGT 793 Query 72640 AACGTAGTTTTTGGTGTAGGTTCTTACACTTATCAGTATATGACTCGTGACACCTTTGCA 72699 || | || || ||| | ||| || ||||| | || | || ||||||||||||| Sbjct 794 AATATTGTATTCGGTATTGGTAGCTATACTTACAACTACAATACACGTGACACCTTTGGT 853 Query 72700 TTTGCTGTTAAAGCAACTCTTGCAAGCATCGGTGGTAAAGAGATTATGCTTGCAAAAGAC 72759 ||||| |||||||||| | ||| ||| | |||| ||||||| || | ||||| Sbjct 854 TTTGCATGTAAAGCAACTGGTTCAATCATTGATGGTGAAGAGATCCTGGTGAGTAAAGAG 913 Query 72760 CCTAAAACAGATAGTGGTGTTAAGAAA 72786 || ||||| || |||||||||| Sbjct 914 CC-AAAAC------TGATGTTAAGAAA 933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 275376398113600