Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027382.1 Length=37146 Score E Sequences producing significant alignments: (Bits) Value seq61333 116 9e-22 seq41978 107 5e-19 >seq61333 Length=826 Score = 116 bits (128), Expect = 9e-22 Identities = 180/256 (70%), Gaps = 1/256 (0%) Strand=Plus/Plus Query 35683 GGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATT 35742 || || || || || || ||||| |||||||| || || || |||||| ||| || | Sbjct 54 GGCGATACCCTTGTGGTGTGGAAGCTGGATCGGCTTGGCCGCAGCATGCGTCATCTGGTC 113 Query 35743 TCTCTCGTAGGGGAATTACGAGAGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATT 35802 ||| | ||| | || || || || | ||||| || || || || ||||| || Sbjct 114 ATGCTCACTGAGGAGCTGCGTGAACGCGGAGTCAATTTCCGTAGCCTGACAGACAGCATC 173 Query 35803 GATACGTCATCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAGATG 35862 ||||| | || ||||||||||||||||| ||||| |||||||| ||||| |||||| Sbjct 174 GATACCAGCACGCCGATGGGGCGTTTTTTCTTTCACGTGATGGGTGCGCTGGCGGAGATG 233 Query 35863 GAACGAGAACTAATCATCGAGAGAACGATGGCTGGACTTGCTGCTGCCAGAAATAAAGGC 35922 ||||| ||| ||||| | || | || || || || | ||||| | | ||||| Sbjct 234 GAACGCGAATTAATCGTTGAACGCACACGAGCAGGGCTCACCGCTGCGCGTGA-AAAGGG 292 Query 35923 CGTATCGGTGGGCGAC 35938 || ||||| || |||| Sbjct 293 CGCATCGGCGGCCGAC 308 >seq41978 Length=891 Score = 107 bits (118), Expect = 5e-19 Identities = 176/254 (69%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 35683 GGTGACACACTGGTTGTCTGGAAACTGGATCGCCTCGGGCGAAGCATGAAACATTTGATT 35742 || || || ||||| || ||||| |||||||| || || || |||||| ||| || | Sbjct 838 GGCGATACTCTGGTGGTGTGGAAGCTGGATCGGCTTGGCCGCAGCATGCGTCATCTGGTC 779 Query 35743 TCTCTCGTAGGGGAATTACGAGAGCGAGGGATTAATTTTCGCAGTCTTACTGACAGTATT 35802 ||| | ||| | || || || || | ||||| || || || || ||||| || Sbjct 778 ATGCTCACTGAGGAGCTGCGTGAACGTGGAGTCAATTTCCGTAGCCTGACGGACAGCATC 719 Query 35803 GATACGTCATCTCCAATGGGGCGTTTTTTCTTCCACGTTATGGGTGCCCTGGCTGAGATG 35862 || || | || ||||| ||||||||||| || || ||||| |||||||| || ||| Sbjct 718 GACACCAGCACGCCGATGGGACGTTTTTTCTTTCATGTGATGGGCGCCCTGGCGGAAATG 659 Query 35863 GAACGAGAACTAATCATCGAGAGAACGATGGCTGGACTTGCTGCTGCCAGAAATAAAGGC 35922 || || ||| | ||| | || | ||| || || || | ||||| || | ||||| Sbjct 658 GAGCGTGAATTGATCGTTGAACGCACGCGAGCGGGCCTCTCCGCTGCGCGAGAAAAAGGA 599 Query 35923 CGTATCGGTGGGCG 35936 || || |||||||| Sbjct 598 CGCATTGGTGGGCG 585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 118561863448800