Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027383.1 Length=44613 Score E Sequences producing significant alignments: (Bits) Value seq31438 82.4 2e-11 >seq31438 Length=6810 Score = 82.4 bits (90), Expect = 2e-11 Identities = 142/198 (72%), Gaps = 10/198 (5%) Strand=Plus/Minus Query 13707 CCTTCGAATTCACCCTCGCCCAACGCGAGCAAGATGCGGATTTTAGCCAGCGAATGCAGG 13766 ||| | || ||||| ||||| || || |||| ||| ||| |||||||| || |||||| Sbjct 4590 CCTGCAAACTCACCTTCGCCTAAAGCAAGCATGATACGGGCTTTAGCCACTGAGTGCAGG 4531 Query 13767 CTATCGGGCGTCTCCTGTGGGGTGTGCT--GTTTGCCGCCGCCGCCTTTA-TGGCC-CGT 13822 || || |||| ||| ||| || || | | | |||| |||||||||| ||| || Sbjct 4530 CTGTCCGGCGCCTC-TGTAGGCTGGCGTACGCTGGCCGT-GCCGCCTTTAGTGGATGCGG 4473 Query 13823 GACGTCGTAGATAATCG-TCATTCGTTCAAATCCTCGGTTACGATTCCGGCTGAAATAAT 13881 |||| || ||| |||| | ||||||| ||| ||| ||||||||||||| Sbjct 4472 TACGTTTTAAGGTTTCGCTCATCAG---AAATCCTGCGTTGTAATTTCGGCTGAAATAAT 4416 Query 13882 AGCGCCACCGATCTCGCG 13899 |||||||||||| || || Sbjct 4415 AGCGCCACCGATTTCCCG 4398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142419291345000