Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027395.1 Length=77327 Score E Sequences producing significant alignments: (Bits) Value seq34483 86.0 3e-12 seq31229 86.0 3e-12 >seq34483 Length=1392 Score = 86.0 bits (94), Expect = 3e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 66652 AATGTGGTGCGCCCTACAGGACTCGAACCTGTAACCAATAGCTTAGAAGGCTACTGCTCT 66711 || |||| ||||||||||||| |||||||||| ||| | ||||||||||| |||||| Sbjct 1315 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 1256 Query 66712 ATCCA-TTGAGCTAAGAGCGCAGA 66734 ||||| ||||||||| |||| || Sbjct 1255 ATCCAGCTGAGCTAAGGGCGCGGA 1232 >seq31229 Length=3871 Score = 86.0 bits (94), Expect = 3e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 66652 AATGTGGTGCGCCCTACAGGACTCGAACCTGTAACCAATAGCTTAGAAGGCTACTGCTCT 66711 || |||| ||||||||||||| |||||||||| ||| | ||||||||||| |||||| Sbjct 48 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 107 Query 66712 ATCCA-TTGAGCTAAGAGCGCAGA 66734 ||||| ||||||||| |||| || Sbjct 108 ATCCAGCTGAGCTAAGGGCGCGGA 131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 246928845570400