Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq104936 91.5 1e-13 seq28556 89.7 4e-13 >seq104936 Length=468 Score = 91.5 bits (100), Expect = 1e-13 Identities = 136/190 (72%), Gaps = 5/190 (3%) Strand=Plus/Minus Query 130805 GTGAACGGTTCAAAGGATTCGTTGTTGCCGAATATTTGTGCTGTAGTTGCGGTGGGCATG 130864 ||| ||||||||||| | ||||| || | ||||| || | |||||||||||| Sbjct 441 GTGTACGGTTCAAAGCACTCGTTAAACCCAAGAATTTGACTAGTTGAGGCGGTGGGCATG 382 Query 130865 TATGCCACTAATAGAGAATTACGAAGACC-GTGCGTCGTGATTTTTCGCTTCAATTCATC 130923 |||| ||| |||||||| || | || ||| ||| | | ||| ||||| ||| Sbjct 381 GGGGCCAATAACAGAGAATTCCGTATCCCAGTG-GTCTTCACCTTTTCTTTCAAGCTATC 323 Query 130924 CCAATCCCATAGAGAGGTAGGTTTGACATTGTTCCACATATCAAATTGTAGTATGCCTTT 130983 ||||||||| | ||||| |||||| |||||||| |||||||| || ||||||| Sbjct 322 CCAATCCCACAATTCTGTAGGCTTGACA---TTCCACATGTCAAATTGAAGAATGCCTTG 266 Query 130984 ACTGGCGGGA 130993 ||| || ||| Sbjct 265 ACTAGCAGGA 256 >seq28556 Length=388 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27039 ACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCG 27098 ||||| || | ||||| || |||||||| ||||| || | | | || | ||||| Sbjct 74 ACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAGAGGGTACGGCCATCTTCC 133 Query 27099 AGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCG 27158 ||||| || |||||| | ||||||||||| || ||||| || | || ||||| || | Sbjct 134 AGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCTTTGTCCTGG 193 Query 27159 ATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTG 27218 ||||| || | | || | || || | | || |||||||| || || | ||| Sbjct 194 ATCTTCGACTTGACATTGTCAATGGTATCCGAAGACTCTACTTCTAGCGTGATGGTCTTG 253 Query 27219 CCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || || || || || || ||||||||||| Sbjct 254 CCGGTGAGGGTCTTGACGAAGATTTGCAT 282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424259590893600