Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq51865 107 6e-18 >seq51865 Length=821 Score = 107 bits (118), Expect = 6e-18 Identities = 156/218 (72%), Gaps = 2/218 (1%) Strand=Plus/Plus Query 443653 AAAAGACTCGCTGGGCAAAACAGTGGCTCGAACGAGAAAATCTC-AGCTTCGTCGAGCGA 443711 ||||| || |||||| | |||| || || |||| ||| | ||| | | | || Sbjct 367 AAAAGGCTGACTGGGCCCTGCGGTGGATCTCCGGACAAAAACTCCACCTTTGCCAACCGT 426 Query 443712 CTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTTAGCCTCCATCTT 443771 || || || || |||| ||| |||||| | || || || ||| |||| ||||||||||| Sbjct 427 CTGGTAGCGTTCGCTGCGGTGGAAGGAATCTTCTTCAGTGGCT-CTTTCGCCTCCATCTT 485 Query 443772 CTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACTGATCAGTCG 443831 |||| | || |||||||| || |||| ||| || |||||| ||||| || ||| || Sbjct 486 CTGGCTCAAGAAGCGTGGCCTCATGCCCGGCCTCACCTTTTCCAACGAGCTCATCTCGCG 545 Query 443832 GGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCT 443869 ||||| || |||| |||||| ||||| || |||| Sbjct 546 TGACGAAGGCATGCACACCGACTTTGCCTGCCTGCTCT 583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1585684322683500