Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_027981.1 Length=42612 Score E Sequences producing significant alignments: (Bits) Value seq60335 102 2e-17 >seq60335 Length=1976 Score = 102 bits (112), Expect = 2e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 39818 AAAACATTGCCAGATAATTCTGTTGACCTTATTGCCACTGACCCACCTTACTTTCGAG-T 39876 ||||| | ||||| | |||||||||||| || ||||| ||||||||||| || || | | Sbjct 886 AAAACCCTTCCAGACAGTTCTGTTGACCTGATCGCCACCGACCCACCTTATTTCCGTGTT 827 Query 39877 AAAGCAAGATGCCTGGGATAACCAGTGGGATGATGAGGCAGAGTTCCTGGCGTGGCTTGA 39936 ||||| | | |||||||| |||||| | ||||| | | | ||| |||||||| | Sbjct 826 AAAGCGTG-TAAATGGGATAATCAGTGGAAGAGTGAGGAACATTACCTTTCGTGGCTTTA 768 Query 39937 CGATATTCTCTTTGACTTATGGCGAGTATTGAAGCCATCGGGCAGTTTGTATCTATTTTG 39996 || |||| | || || ||||| ||| | || || || |||||| | ||| | ||||| Sbjct 767 TGAGCTTCTTTCAGAGTTCTGGCGGGTACTTAAACCGTCAGGCAGTCTTTATATGTTTTG 708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 136025999096400