Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq97857 138 1e-27 seq57763 138 1e-27 seq41695 114 2e-20 seq40057 100 4e-16 seq19335 91.5 2e-13 seq55708 87.8 2e-12 seq104936 86.0 8e-12 seq46431 86.0 8e-12 seq83029 82.4 9e-11 seq54042 82.4 9e-11 >seq97857 Length=911 Score = 138 bits (152), Expect = 1e-27 Identities = 359/540 (66%), Gaps = 7/540 (1%) Strand=Plus/Plus Query 118635 GTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAA-CTGCGAGTCTCTTCATT 118693 || ||||||| || | ||| |||||||| | | ||||||| || || | || | | Sbjct 235 GTAACAACCTGGGTAACTTCGTGAAGCTTCTTGAAATCAAATTCTCCGCG-CTTGTAGTC 293 Query 118694 GACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGT 118753 ||| | || || || | || |||| ||||| |||| |||||| | || Sbjct 294 GACGAAGGATGGCAGTGCTAGAGAGGCCAAGTTACAGACAGCAACCTCATCTGGGGCGGT 353 Query 118754 GTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 118813 |||||| | ||| || ||||| ||||| ||||| || ||||| | ||||| || || Sbjct 354 GTACTCAACAATCTCAGTGCATAAGTTCGAACTGCGGATAGTGCCGAGATTCTTCTGGTT 413 Query 118814 TGACTTTGTG-TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGG 118872 ||||| | || || || ||||||||||||||| | || | || ||||| ||||| | Sbjct 414 G--CTTTGCGGTTGCAAGCGTCCTTGTAAAGCATGAAGGGATTACCAGTCTCAGTTTGAG 471 Query 118873 ACTTGAGAATAGCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTT 118932 || ||| || || | | || | || | || | || || | || || || Sbjct 472 CCTCGAGGATGGCATACGAG-CTTCTGG-GCGCGAACGGTCTCACGACCTTTGTTCTTTT 529 Query 118933 CCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCCTGGTG 118992 ||| || || ||||||||| |||||||| ||||| | | || | ||| || || Sbjct 530 TCTCATAACTTTCGTAGAGGGCCTCAAACTCATCACCGTAGACGTCCGCGAGACCAGGAC 589 Query 118993 CCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGT 119052 || | || || | |||| ||| | ||| ||| | || |||||||||||||| | Sbjct 590 ACTCGTTGGGACACATCAGAGTCCACTCCCCATTCTCTTGGACACGCTTCATGAAGAGAT 649 Query 119053 CTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGA 119112 | |||||||| || || |||| | || ||| |||| |||| || | || || || Sbjct 650 CCGGGATCCACAGGGCGTAGAATAAGTCGCGAGCGCGAACTTCCTCTTTGCCATGGTTCT 709 Query 119113 GACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 ||| | ||||| ||| | | ||||| |||||||| || || ||||| | |||| || Sbjct 710 TACGAAGGTCCAAGAAGCCAAATATATCGGCGTGCCATGGCTCGAGGTAGATTGCGAATG 769 >seq57763 Length=521 Score = 138 bits (152), Expect = 1e-27 Identities = 236/336 (70%), Gaps = 11/336 (3%) Strand=Plus/Minus Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTTAGGGAATCCCCACAAAATGAGGAG 11861 || || || ||| ||||||||||||||||||| ||| |||| |||||| || ||| Sbjct 438 TACCAGGCCTCTACCTCGGAGATGTTTGGTAAGGTTCAGGAAATCCCACAGAAAGAGTCA 379 Query 11862 ACGCCCTTCTATCCACG-ATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGT 11920 |||||||||||||| || | | | ||||| || |||| | || || ||| | Sbjct 378 ACGCCCTTCTATCCGCGTAGTCCT-TATGGTGTGGCAAAACTCTATGCGCACTGGATGAC 320 Query 11921 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGA 11980 || || || || || ||||||||| | ||||| ||||| || ||||||||||| || || Sbjct 319 GATAAACTATCGTGAGTCCTATGGTATTTTTGCCTGCTCCGGGATTCTCTTCAATCATGA 260 Query 11981 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGAT---GGTATCAA-AC 12036 || |||| ||| |||| || ||||| || || || |||||| | | ||| | Sbjct 259 ATCGCCCCTTCGCGGCCGTGAATTCGTCACGCGAAAAATTACCGATACCGTTGCCAAGAT 200 Query 12037 AAATCGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACT 12096 || | |||| || | || || | || | || || ||| ||||| || |||| | Sbjct 199 CAAACTTGGC----AAGGCGCAGGTCCTGGAGCTAGGAAATCTCGACGCCAAGCGGGATT 144 Query 12097 GGGGACATGCCAAGGACTATGTTGAAGCCATGTGGC 12132 |||| | ||||||||| || || || | |||||||| Sbjct 143 GGGG-CTTGCCAAGGAGTACGTAGAGGGCATGTGGC 109 >seq41695 Length=397 Score = 114 bits (126), Expect = 2e-20 Identities = 170/239 (71%), Gaps = 8/239 (3%) Strand=Plus/Plus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 ||| || || |||| || || || || || ||||| || |||||||||||| | || || Sbjct 118 GGCGAAATCGCGGTGCAGCCCTTCATCGCGCGAGATAAGCTCATTCGAGAAGGAAAGGCC 177 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 ||||| | |||||| ||||||| |||| | |||| || || || || |||||||| || Sbjct 178 CGGCATCATACCCCGTTTCTTCAGCCAGTAGATCGAGCAGAACGATCCCGAGAAGAAAAT 237 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194 |||||| || ||| ||||||| || ||||| || || || | | |||| | Sbjct 238 CCCCTCAACGACCGCAAACGCAATCAGCCGCTCGGCGAATGAACCG------TTATC-GA 290 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGC-TTCA 130252 || || ||||||| |||||||||| | ||||||| || | ||| || |||| Sbjct 291 TCAGCGCAGAGCCCACTCGGCCTTTTTCTGAACGCACGGGATCGTATCGATGGCATTCA 349 >seq40057 Length=838 Score = 100 bits (110), Expect = 4e-16 Identities = 223/332 (67%), Gaps = 2/332 (1%) Strand=Plus/Plus Query 11802 TATCAAGCATCTTCCTCGGAGATGTTTGGTAAAGTT-AGGGAATCCCCACAAAATGAGGA 11860 ||||| ||||| | ||||||||||| ||||| || ||| || || || | ||| Sbjct 123 TATCAGGCATCCACTTCGGAGATGTTCGGTAAGGTCCAGGCGATTCCG-CAGATCGAGAG 181 Query 11861 GACGCCCTTCTATCCACGATCCGTCTATGGCGTCTCAAAGGTTGCGGCACATTGGCTCGT 11920 ||||| |||||||| || | ||| ||||| | ||| | || || ||| | Sbjct 182 CACGCCTTTCTATCCGCGCAGCCCCTACGGCGTGGCCAAGCTCTATGCCCACTGGATGAC 241 Query 11921 GAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGA 11980 | || ||||| || ||||| || |||| | | || ||||||||||||||||| Sbjct 242 CATCAACTACCGCGAGTCCTACGGCATCTTCGGCACCAGCGGCATTCTCTTCAACCACGA 301 Query 11981 GTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACCGATGGTATCAAACAAAT 12040 || || | || |||| || |||||||| ||||||||||| | ||| | || Sbjct 302 ATCCCCGCTGCGCGGCCGCGAGTTCGTGACCCGCAAGATCACCGACAGCATCGCCAAGAT 361 Query 12041 CGTGGCGGGTGAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACTGGGG 12100 | | ||| || ||| | | || |||| |||||| ||||| || | |||||||| Sbjct 362 CAAGCTGGGCAAGCTGGACGTACTGGAGCTGGGCAACCTCGACGCCAAGCGCGACTGGGG 421 Query 12101 ACATGCCAAGGACTATGTTGAAGCCATGTGGC 12132 |||||||| || || || | |||||||| Sbjct 422 CTTCGCCAAGGAATACGTCGAGGGCATGTGGC 453 >seq19335 Length=805 Score = 91.5 bits (100), Expect = 2e-13 Identities = 293/450 (65%), Gaps = 10/450 (2%) Strand=Plus/Plus Query 117837 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGAC 117896 |||||||||||||| ||||||||||| || |||||||| || | ||||| |||| Sbjct 239 CGGAGGTAGTACATGCCCGTCTTGAGACCAAGCTTCCAGCCAGCGAAGTGCATGGAGGTG 298 Query 117897 AACTTGGAGAGGGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 117956 | || | ||| || || |||| || ||| | || || || || ||||| Sbjct 299 ATTTTTCCCATGGTGGGTTCTTTCATGTGGATGTTGAGGGACTGAGACTGGTCAATGAAC 358 Query 117957 CGTCCCCGATCCGCCGCCATATCAATCACATCCTTCATCTTGA--TTTCCCACACAGTCC 118014 || || || || ||||| | ||| | | || ||| |||||||||| ||| Sbjct 359 GCACCGCGGTCAGCGGCCATCTGAATAATGT---TCGCTGTGAAATTTCCCACACTGTCT 415 Query 118015 TGTAGAGGTTCTTAATATCATCTGGGATATCCACGATATTTTGGATGGATCCACCCGCCT 118074 | || | |||| | || || || |||| ||| | || || || || | Sbjct 416 TATACAATGTCTTTGTTTCTTCGGGAATATTAGGGATCCTGGCAATCGAGCCGCCATCAG 475 Query 118075 TGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGA 118134 || ||| | | ||||| | || ||||| ||||| || | |||||||| | | Sbjct 476 CGATGATGCGGTTTTTCATGTTCTCAGACCATAGACCCATGTCGACGAGATCCTTGAGCA 535 Query 118135 G--ATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGT 118192 | ||| | |||| || || ||||| || || || | || || || | Sbjct 536 GCCATGGGT--TGACCACTTGGAATTCACCAGCAAGTACACGACGGGAGTATATGTTTGA 593 Query 118193 CGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCAT 118252 |||||||||||||| ||||||||||| |||| ||| || | || || ||||| ||||| Sbjct 594 GGTGTATGGCTCAAAACACTCATTGTTGCCCAGGATCTGAGACGTAGACGCTGT-GGCAT 652 Query 118253 GGGTGCCATGAGAAGGCTGTTACGGAGACC 118282 |||||| |||||||| ||| |||| ||| Sbjct 653 GGGTGCAATGAGAAGAGAGTTGCGGACACC 682 >seq55708 Length=2185 Score = 87.8 bits (96), Expect = 2e-12 Identities = 149/211 (71%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 14219 CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATACATGGTT-G 14277 ||||| | ||| || ||||||||||| || || |||||||| ||||| || || | Sbjct 15 CCCGCGCCGCGATGGCGGCCGACGGCGTCGATCTCGTCGATGAAGACGATGCACGGCGCG 74 Query 14278 ATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACAT 14337 | ||| || | || | || || || ||||| | |||| ||||| ||||| ||||| Sbjct 75 CTCTTCTTGGCCTGCT-CGAACATGTCGCGCACGCGGCTGGCGCCGACGCCCACGAACAT 133 Query 14338 CTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTAGATTCACCCGCGATGG 14396 ||| || || | || | | || || | || ||| || ||| | ||||||||||| | Sbjct 134 CTCGACGAAGTCGGAGCCCGAG-ATGGTGAAGAACGGCACGCCCGCCTCACCCGCGATCG 192 Query 14397 CTCGGGCGAGGAGGGTCTTCCCCGTCCCTGG 14427 | ||||| || |||||||| || || || || Sbjct 193 CGCGGGCCAGCAGGGTCTTGCCGGTGCCGGG 223 >seq104936 Length=468 Score = 86.0 bits (94), Expect = 8e-12 Identities = 171/246 (70%), Gaps = 18/246 (7%) Strand=Plus/Minus Query 118343 CCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGG 118402 |||||| ||||| || || || ||||| || || || || | || |||||||| || Sbjct 292 CCACATGTCAAATTGAAGAATGCCTTGACTAGCAGGAGAGCC-TGGAAGGTCTCATAAGG 234 Query 118403 GCCCTCAACCTCCGCCAA----TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTTT 118458 || || | ||||| |||| ||| ||| | |||||||||||||| || | Sbjct 233 ACCGTCCGTAACGGCCAACTCATTCGAAGC----CTCTAAGGCTGCGTGATACAGAGTCT 178 Query 118459 CAAAAATGCGAGCATTCATTGCCTTGGCCTC-GTCGGAATCAAACGCGAGTCGGCACAAA 118517 | ||||| || ||||| | ||||||||| | || ||||||||| | | | |||| Sbjct 177 CGAAAATCTGAATATTCAGTTTCTTGGCCTCAGGCGAAATCAAACG---GAAGCCTCAAA 121 Query 118518 AT---AAATACATCCGCGAGACC-TTGGACACCGAGGCCAATTGGGCGATGTCTCATATT 118573 || ||| |||| || || || ||| || |||| |||||||| ||||| ||||| || Sbjct 120 ATTTGGAATGCATCGGCCAGCCCTTTGCACCCCGATTCCAATTGGACGATG-CTCATGTT 62 Query 118574 AGACTT 118579 || || Sbjct 61 CGATTT 56 >seq46431 Length=357 Score = 86.0 bits (94), Expect = 8e-12 Identities = 225/339 (66%), Gaps = 12/339 (4%) Strand=Plus/Minus Query 14014 CAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCG 14073 || ||||| ||| ||||| || || || | | |||| | || ||| |||||||| Sbjct 335 CAGAATCTGCTCACGACCACGTACGTCTGGCAAGCCCACGACAACCTGACGGTCAAAGCG 276 Query 14074 ACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAAC 14133 || || || || || || |||||| | || ||||| ||||| || || || | Sbjct 275 GCCCGGACGCAGCAGCGCAGGGTCAAGTACGTCTGGACGGTTGGTCGCGGCAATCACGAT 216 Query 14134 GATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTG 14190 |||||| |||||| |||||||||||||| ||| || | || || | ||||| Sbjct 215 GATGCCT---TCGTTACCTTCAAAGCCATCCATTTCAACCAGCATCTGGTTCAGAGTTTG 159 Query 14191 TTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAAT 14250 ||| || ||||| | || | ||| |||| ||||| ||| ||||| || || Sbjct 158 TTCACGCTCATCGTGACCACCCCCTAAACCAGCACCACGTTGACGACCAACGGCATCGAT 99 Query 14251 TTCATCGATGAAAACGATACATGGT--TGATTT-TCACGGGCAACTTCAAAGATATCTCG 14307 ||||||||||| | || || ||| | ||| | | || |||||| || || || Sbjct 98 CTCATCGATGAAGATAATGCACGGTGCCGCTTTCTTA---GCCTGTTCAAACATGTCACG 42 Query 14308 CACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 14346 || | ||||| ||||| || ||||| || ||||| Sbjct 41 GACGCGGGATGCACCCACACCAACGAACATTTCAACAAA 3 >seq83029 Length=436 Score = 82.4 bits (90), Expect = 9e-11 Identities = 96/130 (74%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 117855 GTCTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGA 117914 ||||||| |||||||||||||| ||||| | ||| ||||||| | | || | | || Sbjct 284 GTCTTGATGCCCTGCTTCCAGGCGTACATGTACATGGAGGACAGCGCGCCGATGTTCGGG 225 Query 117915 CTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCC 117974 ||||||||||| ||||||| ||| || ||||||||| || || || || ||| Sbjct 224 CTTTCCATGAACAGGTTCAGCGAGGCGGACTGGTCGATGAAGGCGCCGCGGTCGGCGGCC 165 Query 117975 ATATCAATCA 117984 || || |||| Sbjct 164 ATGTCGATCA 155 >seq54042 Length=500 Score = 82.4 bits (90), Expect = 9e-11 Identities = 224/339 (66%), Gaps = 12/339 (4%) Strand=Plus/Plus Query 14014 CAAAATCTTCTCGCGACCGCGCACACTGGGTAGGGACACGGTGATCTTACGATCAAAGCG 14073 || ||||| ||| ||||| || || || | | |||| | || || |||||||| Sbjct 166 CAGAATCTGCTCACGACCACGTACGTCTGGCAAGCCCACGACAACCTGTCGGTCAAAGCG 225 Query 14074 ACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGTCGCCGCGATGACAAC 14133 || ||||| || || || |||||| | || ||||| ||||| || || || | Sbjct 226 GCCAGGGCGCAGCAGCGCAGGGTCAAGTACGTCTGGACGGTTGGTCGCGGCAATCACGAT 285 Query 14134 GATGCCCGTCTCGTTA---TCAAAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTG 14190 |||||| |||||| |||||||||||||| ||| || | || || | ||||| Sbjct 286 GATGCCT---TCGTTACCTTCAAAGCCATCCATTTCAACCAGCATCTGGTTCAGAGTTTG 342 Query 14191 TTCGCGTTCATCATTCGCAGGCATACCACCCGCACTGCGTTGCTTACCGACGGCGTCAAT 14250 ||| || ||||| | | | | ||| |||| || || ||| ||||| || || Sbjct 343 TTCACGCTCATCGTGCCCTCCCCCTAAACCGGCACCACGCTGGCGACCAACGGCATCGAT 402 Query 14251 TTCATCGATGAAAACGATACATGGT--TGATTT-TCACGGGCAACTTCAAAGATATCTCG 14307 ||||||||||| | || || ||| | ||| | | || |||||| || || || Sbjct 403 CTCATCGATGAAGATAATGCACGGTGCCGCTTTCTTA---GCCTGTTCAAACATGTCACG 459 Query 14308 CACTCTCTTGGCACCGACACCCACAAACATCTCCACAAA 14346 || | ||||| ||||| || ||||| || ||||| Sbjct 460 GACGCGAGACGCACCCACACCGACGAACATTTCAACAAA 498 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 617427923668000