Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq29103 87.8 1e-12 seq28556 87.8 1e-12 >seq29103 Length=1863 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/144 (75%), Gaps = 3/144 (2%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGA-GAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 || |||| ||||| | ||||| |||| | || ||||||||||||||| || |||| Sbjct 1062 CCACCTCGGAGACGAAGAACCAAGTGGACGCGTCGACTCCTTTTGAATGTTGTAGTCTGC 1121 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || |||| ||||| || || ||||| || || | ||||| |||||||| || Sbjct 1122 AAGAGTGCGGCCGTCCTCAAGCTGCTT-CCGGC-AAGATCAGGCGCTGCTGGTCCGGGGG 1179 Query 34599 CACTCCCTCCTTGTCTGTGATCTT 34622 | ||||||||||| |||||| Sbjct 1180 AATGCCCTCCTTGTCCTGGATCTT 1203 >seq28556 Length=388 Score = 87.8 bits (96), Expect = 1e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 ||||| | ||| || | ||||| || || || ||||||||||||||| ||||| || Sbjct 56 CCGCCACGAAGTCGAAGGACCAAGTGAAGGGTAGACTCCTTTTGAATGTTGTAATCAGAG 115 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| || || || ||||| || || | |||||| |||||||| || Sbjct 116 AGGGTACGGCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAGGA 175 Query 34600 ACTCCCTCCTTGTCTGTGATCTT 34622 | || || ||||| |||||| Sbjct 176 ATGCCTTCTTTGTCCTGGATCTT 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314229799559900