Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028667.1 Length=39593 Score E Sequences producing significant alignments: (Bits) Value seq88192 140 8e-29 seq60211 127 5e-25 >seq88192 Length=597 Score = 140 bits (154), Expect = 8e-29 Identities = 157/208 (75%), Gaps = 3/208 (1%) Strand=Plus/Minus Query 16338 GACCTACATGATCCGCTTCCCGAAGTCGGGGCGGAAGATCCAGGCCCTGAGCAGCCGGCC 16397 |||||| | |||| |||||||| || || | | ||| || |||| ||||||||| Sbjct 525 GACCTATACGATCACCTTCCCGA-GT--GGCCAGCGCATCGTCGCGCTGACCAGCCGGCC 469 Query 16398 GAGCAACCTGCGCGGCCTGCAGGGCGACGTGGTGATCGACGAGGCGGCGTTCCACGAGTC 16457 ||||||||||| |||| |||||| ||| || |||||||||||||| ||||| | Sbjct 468 CAGCAACCTGCGGGGCCGTCAGGGCATCGTCGTAATCGACGAGGCGGCCTTCCATGCAGA 409 Query 16458 CCTGGAGGAACTGCTGAAGGCCGCCCTGGCGCTGACGATGTGGGGTAACAAGGTCCGCCT 16517 ||||| || ||||||||||| ||| ||||||| ||| |||||| | |||||| | Sbjct 408 CCTGGCCGAGCTGCTGAAGGCGGCCTTGGCGCTCTTGATCTGGGGTGGCGAGGTCCATGT 349 Query 16518 GATCAGCACCCACAACGGCGTCGACAAC 16545 |||||||||||| ||||| ||| ||| Sbjct 348 CATCAGCACCCACGACGGCACCGAGAAC 321 >seq60211 Length=495 Score = 127 bits (140), Expect = 5e-25 Identities = 297/440 (68%), Gaps = 26/440 (6%) Strand=Plus/Minus Query 18121 GCGCCGACAACGACGACGAGCCCTATGGCCTCGGACTGGCCCATTGGCTGTACTGGCCGG 18180 ||||||||||||| || | ||| |||||||| || |||||||| | || ||||||| Sbjct 432 GCGCCGACAACGATGATGCGCCGTATGGCCTGGGCCTGGCCCACTACGCCTATTGGCCGG 373 Query 18181 TGTATTTCAAGCGCAACGGACTGAAGTTCTGGCTCACGTTCCTGGACAAGTTCGGTATGC 18240 ||| ||||||||| || |||||||||||||| |||| ||||||||||| | | Sbjct 372 TGTTCTTCAAGCGCTCCGACCTGAAGTTCTGGCTGGTGTTCGCCGACAAGTTCGGCAACC 313 Query 18241 CCACGGCCGTCGGCAA-ATTCGGGAAGAACGCCACGCCAGAGGAGAAGGCCAA--GCTGC 18297 |||| ||||| ||||| |||| | || || || || |||| | || |||| Sbjct 312 CCACCGCCGTGGGCAAGATTCCCG------GC--GGCAAGTGG-GAAGACGAAACGCTGA 262 Query 18298 TGGCCGCCACCC---AGGCG--------ATTCAG-ACCGATACCGGTG-TCATCATGCCG 18344 || |||| | ||||| ||||| | ||| | ||| | || | |||| Sbjct 261 AGGACGCCGTGCTGGAGGCGCTGCTTTCCTTCAGCAGCGA-ATCGGCGATCGTGGTGCCC 203 Query 18345 GAGGACATGTTGGTGGAACTGCTGGAGGCCTCGCGCTCTGGCACGGCCGACTACAAGATC 18404 ||||| | | ||||| |||||||| || | ||| |||| | | ||| | Sbjct 202 GAGGAAACGACCGTGGAGCTGCTGGAAGCGGCCCGCAGCGGCAGCGGCACCTATGATGAG 143 Query 18405 CTGCACGACACCATGGATGAGACCATCGCCAAGGTAACGCTGGGCCAGGTGGCGTCGAGC 18464 ||| ||||| |||||| | | | || ||||| | | |||||| || ||| Sbjct 142 CTGTACGACCGCATGGACGCTGCGCTGGCGAAGGTCATCATCGGCCAGACCGCCAGCAGC 83 Query 18465 CAGGGCACTCCCGGCCGCCTGGGTAACGACGATCTGCAGGCCGACGTGCGCCTCGACCTG 18524 ||||| |||||| ||||| | ||| || |||| ||||| ||||| || ||||| Sbjct 82 GGCGGCACGCCCGGCAAGCTGGGCAGCGAGGAGCTGCGCGCCGAGGTGCGGCTAGACCTA 23 Query 18525 GTGAAGGCTGACGCCGACCT 18544 || ||||| ||||||||||| Sbjct 22 GTCAAGGCCGACGCCGACCT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126380147373000