Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028670.1 Length=44203 Score E Sequences producing significant alignments: (Bits) Value seq28764 116 1e-21 >seq28764 Length=21750 Score = 116 bits (128), Expect = 1e-21 Identities = 118/150 (79%), Gaps = 3/150 (2%) Strand=Plus/Plus Query 981 GTACTAGCCAGGACCAGAATCTGGTGAGTGTGGCGCAGCACTATAACATGAGAGATGCGT 1040 |||||||| ||||| | ||||| ||||||||| |||||||||||| || |||||||| | Sbjct 5898 GTACTAGCTAGGACGACAATCTAGTGAGTGTGATGCAGCACTATAA-ATTAGAGATGCAT 5956 Query 1041 AAACGGTTGACCACCGAGGACAGAGCG-GGGGCTACTAAACGGCCCGGCTGCGAAAGCTA 1099 ||| ||||||| | | ||||| | || || ||| | |||||| | || ||| | Sbjct 5957 AAAACGTTGACCGCGTGGCACAGATAGAGGCGCAACTGAGCGGCCC-TATACGGAAGGCA 6015 Query 1100 AATCAGGTTAGGCACAACGCCGTAATGTTG 1129 |||||||||||||||| |||||||||| || Sbjct 6016 AATCAGGTTAGGCACAGCGCCGTAATGCTG 6045 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141109321419000