Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028698.1 Length=41868 Score E Sequences producing significant alignments: (Bits) Value seq70435 114 3e-21 >seq70435 Length=537 Score = 114 bits (126), Expect = 3e-21 Identities = 144/193 (75%), Gaps = 5/193 (3%) Strand=Plus/Plus Query 18292 ATGCCGAATTCTTTCAGACGTTCGAATTCAAAGGTGCTCGCATCCGCGACGGCCTCAATC 18351 ||||||||||| ||||| || ||||| || |||| ||||| | |||||||| ||| Sbjct 280 ATGCCGAATTCCTTCAGGCGCTCGAACTCGCCGGTGGCAGCATCGGACACGGCCTCGATC 339 Query 18352 ATCTGGTTAAGGTCTTTACCCATAGCGGATGCAGTATTGCCGTAAGAG--CGGAGCGCTT 18409 ||||| || |||||||| ||||| || | || || |||||||| ||| | |||| ||| Sbjct 340 ATCTGATTGAGGTCTTTCCCCAT-GCTGCGGCGGTGTTGCCGTAGGAGGTCAGAGC-CTT 397 Query 18410 CTTCTGATGGAGTGAGGCCTAGAGCTACCAGTTTACGGAACCCTTCCACTGCTTGTTCAA 18469 | || ||||| || ||||| || ||||| || | ||| ||||| || || || || | Sbjct 398 C-TCGGATGGCGTCAGGCCGAGGTTCACCAGCTTGCTGAAGCCTTCAACGGCCTGCTCCA 456 Query 18470 GGCCGTAAGGTGT 18482 ||| ||| || || Sbjct 457 GGCTGTACGGCGT 469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133648882938000