Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028745.1 Length=66103 Score E Sequences producing significant alignments: (Bits) Value seq54635 105 3e-18 seq54636 104 1e-17 >seq54635 Length=814 Score = 105 bits (116), Expect = 3e-18 Identities = 97/123 (79%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 39869 CGCGCGGGTCCACTGCGTACCGGCGCGGCCAAGTGTTGGCCAGTCCTTGGGCGCTGTAGT 39928 |||||||||| | |||||||||| |||||| |||||||||| || ||||||||||||| Sbjct 126 CGCGCGGGTCGATGGCGTACCGGCTCGGCCAGTTGTTGGCCAGGCCCTGGGCGCTGTAGT 185 Query 39929 TGAGATTCTCCACCAGACTCACCAGTCCACCGGACTCGACGCCGATGTTGGCGAGGTAGG 39988 | || ||||| ||||| | |||| | ||||||||| |||| | | ||||| ||| Sbjct 186 TCAGGTTCTCGACCAGGCGGGTCAGTTCGCCGGACTCGTGGCCGCACTGGCCGAGGAAGG 245 Query 39989 CAG 39991 ||| Sbjct 246 CAG 248 >seq54636 Length=518 Score = 104 bits (114), Expect = 1e-17 Identities = 195/286 (68%), Gaps = 8/286 (3%) Strand=Plus/Plus Query 39715 CCGGTCAGCTGGATCAGGCCGCGACCGCGATATCTCCAGCCGTCCCCGTCCTGCTCGCAG 39774 ||||| | ||| | ||| || | || || || ||||||| || ||| || | Sbjct 150 CCGGTGACCTGCAGCAGTCCCCTGCCCCGGTACTTCCAGCCATCGCCGGAAGATTCCGGG 209 Query 39775 CCATTACCCATGCGATCAGCGTACACGTTGTTGGCGATGGC----GACAGGATTGCGAGC 39830 ||||| || |||| | || || ||||||||||||| || | | || |||||| Sbjct 210 CCATTCCCGTTGCGGTTGGCATAGGCGTTGTTGGCGATCGCTTCCGGCCGGCGCGCGAGC 269 Query 39831 CAGGCGGTTTGCCAGGGCATTCGGTACATACGGACGGACGCGCGGGTCCACTGCGTACCG 39890 | ||||| ||| | ||||| | ||| | ||||| ||||| ||||| || Sbjct 270 CTGGCGG----CCAACTCGTTCGGCCTCAGCTCCCGGGCACGCGGATCCACGGCGTAGCG 325 Query 39891 GCGCGGCCAAGTGTTGGCCAGTCCTTGGGCGCTGTAGTTGAGATTCTCCACCAGACTCAC 39950 || ||||| || |||||||| || ||||||||||||||||| || |||||||| | Sbjct 326 GCTGGGCCAGGTTTTGGCCAGGCCCTGGGCGCTGTAGTTGAGGTTTTCCACCAGGCGGGT 385 Query 39951 CAGTCCACCGGACTCGACGCCGATGTTGGCGAGGTAGGCAGCAATG 39996 ||| ||||||||| ||| | ||||| ||||||||| ||| Sbjct 386 CAGCTTGCCGGACTCGTGACCGCACTGGGCGATGTAGGCAGCCATG 431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 211069082571200