Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028746.1 Length=44249 Score E Sequences producing significant alignments: (Bits) Value seq62963 145 2e-30 >seq62963 Length=1157 Score = 145 bits (160), Expect = 2e-30 Identities = 213/301 (71%), Gaps = 3/301 (1%) Strand=Plus/Plus Query 35876 TTTTAATCGGCAGACTGACGAGAGATCCGGAATTAAGATATACTCCATCCGGTGTAGCTG 35935 |||| ||||| | |||| | ||| |||||| | | ||||| || | ||||| |||| Sbjct 271 TTTTGATCGGACGGTTGACCAAAGACCCGGAACTTCGCTATACACCTGCAGGTGTGGCTG 330 Query 35936 TCACCAAGTTTACCCTGGCGGTAGACCGTCCGTATATGAACCAGCAAACGCGTGAGCGAG 35995 | || ||||||| ||||| || || ||||| | || || |||| | ||||| | Sbjct 331 TGACGCAGTTTACGCTGGCAGTGGATCGTCCTTTTACGAGCCAGGGTG---GAGAGCGCG 387 Query 35996 AGACGGATTTCATTAATATCGTGACGTGGAGACAAACCGCGGAAGCCTGTGCCAATCACC 36055 | |||| || ||| |||| || ||||||||| || ||| | || ||||| || Sbjct 388 AAGCGGACTTTATTCCGGTCGTAACATGGAGACAACTGGCAGAAACTTGCGCCAACTACT 447 Query 36056 TTCGCAAAGGCCGTTTGACGGCAGTAGAAGGAAGAATCCAGGTGCGTAATTATGAGAACA 36115 | || ||||| || || ||||| || ||||| | || ||||||||||| |||||||| | Sbjct 448 TACGTAAAGGTCGCTTAACGGCGGTCGAAGGTCGCATTCAGGTGCGTAACTATGAGAATA 507 Query 36116 ATGAGGGCCGCAGAATCTATGTAACCGAGGTTGTGGCTGATAATGTGCGCTTTCTTGAAT 36175 |||| || | | || || || || ||| | ||||||||||| || || ||||||| Sbjct 508 ATGAAGGTAAACGTGTATACGTGACTGAAGTTATTGCTGATAATGTACGTTTCCTTGAAT 567 Query 36176 C 36176 | Sbjct 568 C 568 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141256293654600