Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028751.1 Length=58671 Score E Sequences producing significant alignments: (Bits) Value seq77134 95.1 5e-15 >seq77134 Length=829 Score = 95.1 bits (104), Expect = 5e-15 Identities = 118/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 47767 CGAGATGTGGGAGCAATGCCTGCGGGCCCTCAAACCTGGCGGGCACCTGCTCGCGTTCGG 47826 |||||| |||| | |||||||| | ||||| |||||||| |||||||| ||||| | Sbjct 548 CGAGATTTGGGCTGAGTGCCTGCGCGTGCTCAAGCCTGGCGGCCACCTGCTGGCGTTTGC 607 Query 47827 TGGCTCGCGTACCTGGCATCGGCTGGCTGTGGCAATCGAGGACGCGGGCTTCGAGATTCG 47886 ||| | || ||| ||| || |||| || ||||||||||| || |||||||| || Sbjct 608 CGGCACCCGCACCCAGCACCGCATGGCCGTCCGCATCGAGGACGCCGGGTTCGAGATCCG 667 Query 47887 TGACTCTATCGCGTGGCTGTACGGCAGTGGTTTCCCGAAGTC 47928 ||| ||||| ||| | ||||| ||| | || ||||| Sbjct 668 CGACATGATCGCCTGGGTTTACGGGTCTGGGATGCCTAAGTC 709 Score = 82.4 bits (90), Expect = 3e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 48300 GCTGGGGGACGGCTCTGAAGCCCGCGTTTGAGCCGATTGTGGTGGCGCGTAAGCCTCTCG 48359 ||||||| || || || |||||||| | |||||||| || || || |||||||| Sbjct 735 GCTGGGGCACCGCCCTCAAGCCCGCCCTGGAGCCGATCACCGTCGCCCGCAAGCCTCTGT 794 Query 48360 CGGGCACGGTCGCGGCGAACGTGCTGGAGCACGGC 48394 | ||||| ||||||||||||||||||| ||| ||| Sbjct 795 CCGGCACCGTCGCGGCGAACGTGCTGGCGCATGGC 829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187335284563800