Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq34483 93.3 4e-14 seq34305 93.3 4e-14 seq31229 93.3 4e-14 seq47791 82.4 8e-11 >seq34483 Length=1392 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 64856 AAAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCT 64915 ||| ||| | | ||||||||||||||||||||||||| ||||||||||| | |||||| Sbjct 1315 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 1256 Query 64916 ATCCAACTGAGCTAAG 64931 ||||| |||||||||| Sbjct 1255 ATCCAGCTGAGCTAAG 1240 >seq34305 Length=2218 Score = 93.3 bits (102), Expect = 4e-14 Identities = 126/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Plus Query 55541 GTAAATGTTCTGTTAATAACATCTTCTTTCTGTTCTGCAGTCAGAGAATTAAATCTGACG 55600 ||||| || | | |||| || || | | ||| ||| || || || ||||| | ||| Sbjct 599 GTAAAGGTACGGGTAATCACGTCCTGCTGCTGCTCTTTGGTGAGCGAGTTAAAGCGAACG 658 Query 55601 GCATACCCAGAAACGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAGCATCT 55660 ||||| || |||||||| || ||||| || |||||||| ||||| | || | || || Sbjct 659 GCATAGCCCGAAACGCGGATGGTTAACTGAGGATATTTCTCAGGGTTATCCATTGCGTCC 718 Query 55661 AACAACATTTCTTTATTAAGAACATTGACATTCAGATGTTGTCCACCTTCGATTCT 55716 | ||||||||| || | || || ||||||||||| || || ||||| || || Sbjct 719 ATCAACATTTCCCGGTTCATCACGTTAACATTCAGATGCTGGCCGCCTTCAATACT 774 >seq31229 Length=3871 Score = 93.3 bits (102), Expect = 4e-14 Identities = 66/76 (87%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 64856 AAAATGGTACACACTACAGGATTCGAACCTGTGACCTAGGGCTTAGAAGGTCCTTGCTCT 64915 ||| ||| | | ||||||||||||||||||||||||| ||||||||||| | |||||| Sbjct 48 AAAGTGGCGCGCCCTACAGGATTCGAACCTGTGACCTACGGCTTAGAAGGCCGGTGCTCT 107 Query 64916 ATCCAACTGAGCTAAG 64931 ||||| |||||||||| Sbjct 108 ATCCAGCTGAGCTAAG 123 >seq47791 Length=2831 Score = 82.4 bits (90), Expect = 8e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 63156 CCCACGGAGATTCGAACTCCGGTTACCTGCTCGAAAGGCAGGGGTCCTTACCACTAGACG 63215 |||||||||| | ||||||||||| ||||| |||||||||| ||||| ||||||||||| Sbjct 580 CCCACGGAGACTTGAACTCCGGTTTCCTGCGTGAAAGGCAGGCGTCCTGACCACTAGACG 521 Query 63216 ACGGG 63220 | ||| Sbjct 520 ATGGG 516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517392721812000