Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028808.1 Length=90743 Score E Sequences producing significant alignments: (Bits) Value seq27013 82.4 4e-11 >seq27013 Length=32742 Score = 82.4 bits (90), Expect = 4e-11 Identities = 155/227 (68%), Gaps = 6/227 (3%) Strand=Plus/Plus Query 8612 AACTAACACGACAAACGGTTTATACCCTATTCGTG---ACTTTATCTTAACCAAGAAGTC 8668 || |||||| ||||| ||||||| |||||||||| || |||||| ||| |||| Sbjct 13589 AAGTAACACAACAAATAGTTTATATCCTATTCGTGATCACATTATCT---ACAAACAGTC 13645 Query 8669 TGCAACTGGTAACGTGCTGTTTATTGTACCTGACTATGAAGAATTGAAGTACGTCTATGA 8728 | || || || || |||||||||||||| || |||||| | |||| | ||| | Sbjct 13646 TCAAAAGGGGAATGTTCTGTTTATTGTACCCGAATATGAAAAGCTGAAAAATCAGTATCA 13705 Query 8729 AATTGCTTGGGATATTGACACTTTTGATATGATTGATTGTTATGCAATTGTTCAAAAATT 8788 | ||| |||||| |||| | | ||| |||| || |||| ||| || || || Sbjct 13706 ATATGCCTGGGATGTTGATAATAAGGATTTGATGGAAACATATGGTATTTTTACTAAGTT 13765 Query 8789 CACTGGTCAAGCTATCTCTTCAGATTTCTATGTTGACTACTCAAAGT 8835 ||| | ||| | ||| | | ||| ||||| || ||| | |||| Sbjct 13766 CACCGATCAGGGGATCAGTGCGGATACTTATGTGGATTACACTAAGT 13812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 289791869483200