Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028809.1 Length=58637 Score E Sequences producing significant alignments: (Bits) Value seq70435 311 3e-80 seq34472 93.3 2e-14 >seq70435 Length=537 Score = 311 bits (344), Expect = 3e-80 Identities = 327/424 (77%), Gaps = 6/424 (1%) Strand=Plus/Minus Query 22075 AAGGCCGCCGTCGCGTTCGACGCCCTGCAGGAGTTCGCCACCAAGACCCCCTACAGCCTC 22134 ||||| || || || |||| || |||||||| | ||| | || || || |||||||| Sbjct 513 AAGGCAGCTGTGGCTTTCGCTGCGCTGCAGGAAT-CGCGGCGAAAACGCCGTACAGCCTG 455 Query 22135 AACCAGGCGGTCGAGGGCTTCACCAAGCTGGTCAACCTCGGCCTGACGCCGAGCGAGCGC 22194 | ||||| || || ||||||| ||||||||| ||||||||||||||||| |||| Sbjct 454 GAGCAGGCCGTTGAAGGCTTCAGCAAGCTGGTGAACCTCGGCCTGACGCCATCCGAGAAG 395 Query 22195 GCCCTGCTGTCGTACGGCAACACCGCCAGCGCGATGGGCAAGGACCTCAACCAGATGATC 22254 || ||| || ||||||||||||||| || ||||| || |||||||| ||||||||| Sbjct 394 GCTCTGACCTCCTACGGCAACACCGCCGCAGC-ATGGGGAAAGACCTCAATCAGATGATC 336 Query 22255 GAAGCCGTGGCCGACGCCGCCACGGGCGAGTTCGAGCGCCTGAAGGAGTTCGGCATCAAG 22314 || |||||| |||| || ||||| ||||||||||||||||||||||| |||||||||| | Sbjct 335 GAGGCCGTGTCCGATGCTGCCACCGGCGAGTTCGAGCGCCTGAAGGAATTCGGCATCACG 276 Query 22315 GCCAAGCAGGAGGGTGACAAGGTCACCTTCACGTTCCAGGGGGTCAAGACGACCATCGGG 22374 | | ||| |||| |||||||| || | || |||| || |||| |||||||||||| Sbjct 275 TCGAGCCAGCAGGGCGACAAGGTGTCCCTGACCTTCCGTGGCGTCACCACGACCATCGGG 216 Query 22375 AACAACGCGGCCGAGATTGAGCAGTACCTCACCAGCCTAGGCGAGAACCAGTTCGCCGGC 22434 || | ||| ||||||||| ||||||| | ||| ||| | | | ||||||||| Sbjct 215 AAGAGCGCCAAGGAGATTGAGGGCTACCTCATGAACCTGGGCCTGGTCGATTTCGCCGGC 156 Query 22435 GCCATGGAGC-GC-CGCATGGACACGCTCGACGGCGCCATCGCCAACCTTGGCGACACCT 22492 |||||||| | || |||| |||| || ||||| |||||| | ||||| ||||| || | Sbjct 155 GCCATGGATCAGCGCGCAAAGACA--CTGGACGGAGCCATCTCTAACCTGGGCGATACTT 98 Query 22493 GGGA 22496 |||| Sbjct 97 GGGA 94 >seq34472 Length=3295 Score = 93.3 bits (102), Expect = 2e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 4907 CTGTGGGACGCGGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4966 ||||||||| | ||||| |||||||| |||| |||||||||||| || | | ||| Sbjct 2717 CTGTGGGACATGATCATGGTCTCCACCTACGACTACGCCGAGCCGGGCTTCATCCTGATC 2658 Query 4967 GACCGCATCAACGAGATGAACAACCTCCACTACTGCGAGACCATCGCGGCGACCAACCCG 5026 |||||| ||||||| ||||||||| | | ||||||| |||| |||||||| || Sbjct 2657 GACCGCGTCAACGAAATGAACAACAACTGGTGGTGCGAGAACATCCGCGCGACCAATCCT 2598 Query 5027 TGCG 5030 |||| Sbjct 2597 TGCG 2594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187226652911400