Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028810.1 Length=52357 Score E Sequences producing significant alignments: (Bits) Value seq77134 141 3e-29 >seq77134 Length=829 Score = 141 bits (156), Expect = 3e-29 Identities = 184/252 (73%), Gaps = 8/252 (3%) Strand=Plus/Minus Query 40290 TTGAGCGACTTCGGGAACCCGCTGCCGTAGAGCCACGCGATCGAGTCGCGGACCTCGAAC 40349 ||| | ||||| || | ||| ||||| | ||| |||||| |||||||| ||||||| Sbjct 715 TTGTGGGACTTAGGCATCCCAGACCCGTAAACCCAGGCGATCATGTCGCGGATCTCGAAC 656 Query 40350 CCGGCGTCCTCGATGGCCACGGTCAGCCGGTGCCAGGTGCGGGACCCGCCGAAGGCGAGC 40409 ||||||||||||||| |||| || |||||| |||||||| ||| | || || ||| Sbjct 655 CCGGCGTCCTCGATGCGGACGGCCATGCGGTGCTGGGTGCGGGTGCCGGCAAACGCCAGC 596 Query 40410 AGGTGCCCACCGGGCTTGAGGACCCGCAGGCATTGCTCCCACATCTCGACGTCGAAAGCG 40469 ||||| || || |||||||| || |||||||| | |||| |||||| || || Sbjct 595 AGGTGGCCGCCAGGCTTGAGCACGCGCAGGCACTCAGCCCAAATCTCG--GT-----GCT 543 Query 40470 ATGCCCG-AGCCGTCCCACTTCTTGCTCATGAATCCCAGTTCGTAGGGCGGGTCGGTGAC 40528 || || | |||||| | | | |||||| |||| |||| ||||| |||||||| Sbjct 542 TGGCACGTCGTAGTCCCAGCGCCTACCCATGAACGCCAGGCCGTATGGCGGATCGGTGAC 483 Query 40529 GATGGAGTCGAC 40540 ||| || ||||| Sbjct 482 GATTGAATCGAC 471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167161747703400