Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028817.1 Length=93879 Score E Sequences producing significant alignments: (Bits) Value seq66202 91.5 9e-14 >seq66202 Length=972 Score = 91.5 bits (100), Expect = 9e-14 Identities = 168/245 (69%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 8309 GTTGCTTTCACTGCAAATCCGAAAGTGTCTCGGGTGTTGCACTGGTAGGTGTAACTGCCA 8368 |||||||| |||||| || || ||||| || || ||| | | ||| || || || ||| Sbjct 870 GTTGCTTTACATGCAAAACCAAAGGTGTCACGTGTATTGTAGTTGTAAGTATAGCTACCA 811 Query 8369 ACTCCAAACACTACGTTCAGGGAAGCGAAACCTTTCTCCTTCAAGCGCTCCAAGATTTTA 8428 | || || || | || || || |||||||| | | |||||| || ||||||| | Sbjct 810 ATACCGAATACAATATTACTTGATGCAAAACCTTTAGCTTCCAAGCGTTCAAAGATTTCA 751 Query 8429 GCTGCTCGGCGAGTC---GTAATGGAATCCCCATAGATCAAACCGATATGAGAATCGAGC 8485 | || ||| || || || ||||| |||||||| | ||| | || | ||| || Sbjct 750 GTGGC---GCGTTTCAGAGTGATTGAATCACCATAGATTACACCAACGTGTGTATCAAGA 694 Query 8486 ATCTTATAACCTGCTTCATTCACAGTACCGCCGAAGGTTTCCCACAGAACTTGGATAGCT 8545 | ||| |||||| || || ||| || ||| ||||||||||||| || | || | Sbjct 693 ACCTTGTAACCTTTAGAGTTAACTTCACCACCAAAGATTTCCCACAGAACCTGAACAGAT 634 Query 8546 CCCTT 8550 ||||| Sbjct 633 CCCTT 629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299811133272000