Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028831.1 Length=61235 Score E Sequences producing significant alignments: (Bits) Value seq36477 199 2e-46 seq75318 86.0 2e-12 >seq36477 Length=1037 Score = 199 bits (220), Expect = 2e-46 Identities = 538/816 (66%), Gaps = 8/816 (1%) Strand=Plus/Minus Query 37466 GACCGTCAGACTGTTGACCCATTCATGTTAAAACATTGTCCTTCCTGGAAGGAGGATATG 37525 ||||| ||||| | ||||||| | | | || || || || |||||| ||| ||| Sbjct 1004 GACCGCCAGACAGCAGACCCATACCTTCTGCAAAATGCGCCATCATGGAAGCCGGACATG 945 Query 37526 ATTGGCAAGGGTATTGCATGGCTACGTTTAAGCTTAAAGTTTGATGCTGAAAAATTCCCA 37585 || || ||||| || ||| | || | | | | |||||||||||||| |||||||| Sbjct 944 ATCGGTAAGGGCATCAGTTGGTTGCGGGTCACCCTTAAGTTTGATGCTGAGAAATTCCCG 885 Query 37586 TCCGGTTTGCCAAACGTCAAGGTGTTGAAAAAG--GGACGTAGAGTTTATGACCCACGTT 37643 || || | |||||| ||| || ||| || |||||| ||||||||||| | Sbjct 884 TCAGGCATTCCAAACATCACCGT--TGATAAGCTCGGACGTCAGGTTTATGACCCGAGAA 827 Query 37644 CCGGTCAAACTGTCTTTAGCGATAACGCTGCTCTTGTTATTCTTGATTATTTCCGCACGT 37703 |||| || ||| | | ||| |||| || || || ||||| || |||| | | | | Sbjct 826 CCGGGCAGACTCTTTACAGCAATAATGCAGCCCTGTGCATTCTGGACTATTACAGGAACT 767 Query 37704 A-TTTAAAGCGAAAGGACGAGAATATTAACTGGGACCAATTCAAGGAAGCTGCTAACATC 37762 | |||||| | ||| || |||||||| || || |||||||||| ||||| Sbjct 766 ACCTTAAAGTG-CCTGACTCAGCCATCAACTGGGATCAGTTTCAGGAAGCTGCAAACATT 708 Query 37763 TGCGATGAGTTTGTTACTAACGCAGATAACACTACGGAAAGACGCTATCGCATTAACGGT 37822 | |||||| |||| || | | | | | || || || ||||||| |||||||||| Sbjct 707 TCGGATGAGATTGTCACAAGCACTGGTGACCAGACAGAGCGACGCTACACCATTAACGGT 648 Query 37823 GAGTTTGAAGTGGACGAAGCACCTGCCAAGATCCTTGATGCTATGCTTGAAGCTTGCGGT 37882 || || || | |||| |||| || || || || ||||| || ||| Sbjct 647 GAATTCGACCTTAGCGAAAATAAAGCCAGCATTCTCGAAGCGATGCTGTCTGCCTGCTCG 588 Query 37883 GGGGAACTAACCTATATTGGCGGTAAGCATGGTCTGTTAGTTGGTGCTTATTACGGCCCG 37942 || ||| || || || | ||| |||||||| | | |||||||||||||| || ||| Sbjct 587 GGAGAAGCGACATACATAGCCGGAAAGCATGGGATTCTCGTTGGTGCTTATTATGGTCCG 528 Query 37943 GCCACCATGACTTTGGATGAAAG-CTGCATTGCTGGGGATATCAAAATAATCCCTGAGAC 38001 || || | | ||| || | || |||| || || ||| | ||||| |||||| Sbjct 527 GCAACAGAGGAAATAACTGAGAGTCAGC-TTGCGGGTGACATCGAGATAATGCCTGAGGT 469 Query 38002 GTCTTATAAAGAGCGTACCAATACCATTACAGGTACATTCGTCGACCCGAAGCAAACATA 38061 |||| | ||||| || || || | || || || || |||||| | |||| ||| Sbjct 468 GTCTCAGGCTGAGCGAGTTAACACAATAAAGGGAACGTTTGTTGACCCGCAACAAAGATA 409 Query 38062 CGCTGAAGCAGATTTCCCTCCAGTTGTGGTTAAGGAATGGGTGGAAAAAGATGGCGGTGA 38121 | || | ||||||||| | || ||| || ||||| | | ||||||||| || Sbjct 408 TACAGAGGTAGATTTCCCGCAGGTATCGGTATCAGACTGGGTAGCAGAAGATGGCGTGGA 349 Query 38122 AATAACGCAAGACATGGATTTCCGCTTTGTTACAAGTGAATATCAAGCTCAACGTCTTGC 38181 || | || ||| || | | |||||||| || |||| || ||||||||||| || Sbjct 348 GATTTCACAGGACCTGAAACTGCGCTTTGTAACTTCGGAATTCCAGGCTCAACGTCTCGC 289 Query 38182 TAATATTATTTTACGTCGTAAGCGTGTTGGTCGAACAATTGAAGTGCCGTGTAACATGAA 38241 | |||| | | || | || ||| ||||| || | || | | ||| ||| Sbjct 288 TGATATCAAGCTCAAGCGCACCCGCGTTTCGCGAACCATGAACGTTACTTTAAACCTGAG 229 Query 38242 GGGGTATAAATTCCGCCCTGGCATGTATGTCAACGT 38277 || ||||||| ||| || |||||||| ||||| || Sbjct 228 CGGCTATAAATACCGTCCGGGCATGTACGTCAAAGT 193 >seq75318 Length=1714 Score = 86.0 bits (94), Expect = 2e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 36512 TTACCGGATCGCTATACAGATGAAAGTCAACAGCGTTTATATCCAGGCGACCGTTTCTTT 36571 || |||||||||| || |||||| ||| ||| | | | ||||| |||||| | ||| Sbjct 1421 TTCCCGGATCGCTTCACTGATGAATCTCATCAGGCGTCAGAGCCAGGAGACCGTATTTTT 1480 Query 36572 AGATACATTGCACAAATGGCTGAACGTTCAATCTTTTGGGGGAGTAAGAAAGATGCGCCA 36631 | ||| | ||||| ||| | || ||||| || || ||||| || || || ||||||||| Sbjct 1481 CGGTACGTAGCACAGATGTCAGAGCGTTCTATTTTCTGGGGCAGCAAAAAGGATGCGCCA 1540 Query 36632 GGGTTCTCCTAT 36643 || || ||||| Sbjct 1541 GGCTTTACCTAT 1552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195527389174200