Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Puccinia_20arachidis_20[genbank_20GCA_5F001013415.1_202015-05-26] 130,300 sequences; 87,617,276 total letters Query= NC_028837.1 Length=41149 Score E Sequences producing significant alignments: (Bits) Value seq83747 95.1 3e-15 >seq83747 Length=1529 Score = 95.1 bits (104), Expect = 3e-15 Identities = 245/369 (66%), Gaps = 11/369 (3%) Strand=Plus/Plus Query 36202 GAGGCTG-AATTTGAGAAATACCGCATTTTCAAAACGGTCACCTTTGAAGAAAAAGAAGT 36260 ||||||| ||||||| ||||| || |||| ||||| |||| |||||| | || Sbjct 592 GAGGCTGTAATTTGAAAAATATCGTATTTATAAAACAATCACATTTGAA-----ATTCGT 646 Query 36261 GAA-CATCACATCCAGTTACCAA-GAACGGT---TTCACGGTCAGACAAACGTAACCAGT 36315 ||| |||||| | | | | || | ||| | | || || | || || || |||||| Sbjct 647 GAAACATCACTTACTGCTTCCTATGAAGCGAGAATGCATGGCCCAACCAATGTCACCAGT 706 Query 36316 GATTCAACGGCCAATGTGGCTATTTATAACATAGATACTCAGGCAGCCAGAAAAGCTTAT 36375 ||| | || || | || |||||||| ||||||| | || || || || ||| Sbjct 707 GATCCGACCGCTGGCGCAGCCATTTATAATGTAGATACACCTGCGGCACGACGTGCCTAT 766 Query 36376 ATAGAGCGTATAGATAGGGCTGTAGCAAGGCTTCATCCCAAGGAGCAGCTATTGATTCGC 36435 || ||| | || | ||| || | || | |||||||||| | ||||| Sbjct 767 TGCGAACGTGTGGAGGCGATTGTGGCTCGCCTGAGTGAACGGGAGCAGCTACTCATTCGT 826 Query 36436 GAGCGATATCTGAAGCAGGATTATGTGTATGATTATGTCATCTATAACCAGGTTTTTAAT 36495 || || ||| ||||||||||| |||||| |||||| | || | || | ||| || Sbjct 827 GAACGGTATTTGAAGCAGGATGATGTGTTTGATTACAAAGTGTACAGTCATCTGTTTGAT 886 Query 36496 CCTCCAATCAGTGAAAAAACATACGCAAAAATAAGGTGGAAAGCTTTTTACAAACTGGCC 36555 || || ||||| | | || |||| |||||| | | ||||| ||||| |||||||| Sbjct 887 CCACCGATCAGCAAGGACACCTACGTAAAAATTCGTAGCAAAGCCTTTTATAAACTGGCA 946 Query 36556 TTGGCTTTG 36564 | |||||| Sbjct 947 CTTGCTTTG 955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 131351642994600